Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00127 ATGGCTGATTCAGGCTCAGCTTCTTCCAAGAGAATGTGGTGCTCCATCCCTGAAAGATTTCAGCTGCATGCGGCCATGTTGGCCCAGCAGTTTGGTTATGCTGGGTTCTGTGTGGTCTCAAGAGCTGCACTTAACATGGGAGTTAGCAAACTTGTTTTCCTAGTCTATAGGAACATCATTGCTTTGCTTATGCTCCTTCCCTTTGCCTACTTCTTGAAAAAGAAGGTAAACCAAGGTTTCTACTTGCTTGGCTTGGATAACACGTCCCCTACCTTCGCATCAGCAACACAGAACTCTGTCCCTGCCATTACATTTCTCATGGCAACCATATTCAGGATTGAACAAGTGAGGCTGAATAGAAAAGTACTTTGTGTTGTTGGGGAAACCATGATTACCCTTTACAAAGGGGAAAGAACTGGACCTTTGGTTGCCTCTACCTCATTGGGCATTGCTTGTCTCGATCTGGTTGGCTCGTGTTACAAGCACCTGTTCTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTCTTCCCGTTTCTTGTTATTGCTTTGGTCTTTGAGAGAAACGCACAAGCATATTGATGCTTTGTTGAGAGTGTCTGGTGTCACCGTGGAGGGATCTTCTCTGGTGTCAGATGAGACTGTTGCCACTCCCCCAGCTGCTGACGCGGAGGCTACTGCGATTGAGAACGATGATGATGATGACACCCATAAACCCAGTTCACGTTCTCCTTCTCATTTCGGAGGATGGTGTGATAAGGCTCCTAAGCTTCAACCACGAAGGGGAACATAG 813 0.4699 MADSGSASSKRMWCSIPERFQLHAAMLAQQFGYAGFCVVSRAALNMGVSKLVFLVYRNIIALLMLLPFAYFLKKKVNQGFYLLGLDNTSPTFASATQNSVPAITFLMATIFRIEQVRLNRKVLCVVGETMITLYKGERTGPLVASTSLGIACLDLVGSCYKHLFSRSTQLASLSLPIHVSLDSSRFLLLLWSLRETHKHIDALLRVSGVTVEGSSLVSDETVATPPAADAEATAIENDDDDDTHKPSSRSPSHFGGWCDKAPKLQPRRGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00127 270 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 126 - -
Rops8g00127 270 PANTHER WAT1-RELATED PROTEIN 24 159 IPR030184 GO:0016020|GO:0022857
Rops8g00127 270 MobiDBLite consensus disorder prediction 217 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00127 Rops-Chr8 2961602 2963833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00127 1 136 Nodulin-like Gene Family AT1G75500 59.880 8.02e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00127 - - gmx:100792395 216.853