Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g00123 | ATGAAACCTTTGCTTCACTCATCTTCCATTTTCTTTTTATGGGTCACACTTGTCTTCTTAATCAATGTTCCAACATATCTTTGTCAGGACGATGGCCACTACACCAATTGCAGTAAAACTTTTACCTGCAGAGGAGTTGCAGCCTTTCCTGGTATTCTTTGCTGCATGTACTTTAAATTTGTGGGGAAACGAAGGAGAAAAACCACTGAGCAATCAAGAAGCAAGGACTTCCTCACTCCTACTTCTGGTGAACTCAAAGATGGACGTGTGGTTATAGTGAAACACCTTTATAGAAGCAATTTGGATGATGAAGTTAAACGTGTTGATCGGTTCATGAATGAAGTTAAGATTCTAGCTTGCTTACAACATCAGAACCTGGTGACACTCTTTGGTTGCTCCAATAGACATAGCCGAGAACTTCTCCTTGTTTATGAATTCATGCATAATGGAACCGTGGTTGATCATCTTTATGGAAGTAGATCAAAATCTACTTTACTCCCTTGGCCAGTAAAATTGAACATTGCAATAGAAACAGTTGAGGCACTAGCCTACCTCCACGCAAATTATGTCATACACCGTGACGTAAAATCCAACAACATTATCCTAGATGATGAATTTCACGTAAAGGTTGTCGATTTTGGTCTCTCACAGTTGGTCCCAGATGATGTAACTCATGTGTCAACTGCTCCAAAAGGAACACTTGGTTACATTGACCCTGAGTATTAG | 726 | 0.3994 | MKPLLHSSSIFFLWVTLVFLINVPTYLCQDDGHYTNCSKTFTCRGVAAFPGILCCMYFKFVGKRRRKTTEQSRSKDFLTPTSGELKDGRVVIVKHLYRSNLDDEVKRVDRFMNEVKILACLQHQNLVTLFGCSNRHSRELLLVYEFMHNGTVVDHLYGSRSKSTLLPWPVKLNIAIETVEALAYLHANYVIHRDVKSNNIILDDEFHVKVVDFGLSQLVPDDVTHVSTAPKGTLGYIDPEY* | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g00123 | 241 | Gene3D | Phosphorylase Kinase; domain 1 | 77 | 147 | - | - | |
Rops8g00123 | 241 | ProSiteProfiles | Protein kinase domain profile. | 55 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g00123 | 241 | SMART | serkin_6 | 58 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g00123 | 241 | Pfam | Protein kinase domain | 86 | 240 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g00123 | 241 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 77 | 241 | IPR044652 | GO:0004672 | |
Rops8g00123 | 241 | SUPERFAMILY | Protein kinase-like (PK-like) | 84 | 241 | IPR011009 | - | |
Rops8g00123 | 241 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 241 | - | - | |
Rops8g00123 | 241 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 190 | 202 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g00123 | Rops-Chr8 | 2799991 | 2806703 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g00123 | 77 | 241 | Receptor kinase-like Gene Family | AT1G25390 | 60.241 | 7.16e-62 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Rops8g00123 | Pkinase | 7.4e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g00123 | - | - | lja:Lj1g3v3289980.3 | 245.358 |