Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00121 ATGCATTTCCTCCATAGTGATAGCAACAGTTGTCGACATGGTCACAAGCGAAGAATGGGTTTGGTAGCTTGGGCTGTGATGCCCTTCCACTTCATAGGTGGTCTCATTCAAGCCAAATCTGCCAAAGGATTTTCAGGTGACTACTCTGTTGCACATTCTGAGCTTGTTGCTCTAGCATCTGAGTCCACAACCAACATAAGGACTATTGCATCATTTTGTCATGAAGAACAGGTACTGAAGAAAGCCAAAACATCTCTGGAAATTCCAAAGAAAAAGTACAGGAAAGAAAGTATCAAATATGGTATCATTCAAGGTTTCTCCCTTTGCTTATGGAATATTGCACATGCTTTGTTGCTTTGTGGTACACAACAATTACAGTTGTGA 384 0.4089 MHFLHSDSNSCRHGHKRRMGLVAWAVMPFHFIGGLIQAKSAKGFSGDYSVAHSELVALASESTTNIRTIASFCHEEQVLKKAKTSLEIPKKKYRKESIKYGIIQGFSLCLWNIAHALLLCGTQQLQL* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00121 127 Pfam ABC transporter transmembrane region 19 123 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops8g00121 127 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 18 120 IPR039421 -
Rops8g00121 127 SUPERFAMILY ABC transporter transmembrane region 18 120 IPR036640 GO:0005524|GO:0016020
Rops8g00121 127 Gene3D ABC transporter type 1, transmembrane domain 16 125 IPR036640 GO:0005524|GO:0016020
Rops8g00121 127 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 18 119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00121 43 111 Calmodulin-binding Proteins AT2G36910 35.897 6.46e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00121 K05658 - gmx:121172606 188.734