Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00092 ATGCTCTGTAGTTGGAGCATTATTTTTGCAGTGTTACTTGATGCTTATGATTTGCATCAAAGGTTGCTTTCTGAGTCAGTGCTGTCGTGGGTAGCACAGGGGTTTTGCAGGGTTGTTCTCATTCTTTTTTGGATAACATTACTTGTTGCAGAGATGAATGATTCTACGGTAAATAATTTGGCCATTGTGGAGAAGAAGGTGCAAAAGCCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAGACTTGCAAAGAAAAAGCTCTTCTCTAAGAAACTCCTACCTCCTGCTCGTGCAAAGAAGTTTAGGGCAGATGAAAAAATGCCAAATTCCAAGCTCCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCAAGTGCCAAAAAAAGTGGGAATCATGGTGTAGATGTAGAGCAAAAGAGTGAAATGCGAGTTCCAAGTTTGGTAGCTAGGTTGATGGGTTTAGAATCTATTCCAGCTTCTCAGCGAGATAAGTCAAAGAAAGCTTCCTCTTCTGATAGTTATGGTGATGGGAAGGAGTCTTTGGCTGATCATTGTGAGTTGGATAGGCAAGGTGTGGATTTGGAGATGGGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTACAGAAAACCGGGGCGTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCATTGCATATGAGGAGTGTTTTTTCACGAGCTAAAAGGTATAACCATCATCATCATCATCATCCAAAGCTTGCTTCTCCATTGAAGAGCCCAAGAATCAGTTCTGGAAAAAGTGCTTCTAGAAGTTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCTGCAGGCTAGAAGTAGAGCTAAAGGTTCTCTTCAAAATCATGCTTCCATGCATCCTCCCAAGACTGGCACTGTGACAAATGGTGTGGGAAATAGGTCAGAAGTTATGCAAAATCAATCTTGCCATGATGCCAGCACGGCCAAATCTTTGATGGGGCAGGCTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTATTGACTGCAGGCCAGAGATTGGGGGACATACAGCTGTTCCTCCACCTGTTGTTTCAGATATGATCAATGCTACCTCTATGGTATCATCACAGAAGAAGGGAAAGTCATTCACTCCCTCTAATGGACAGGAAAGAGATATCGTTCTTTTGAGAAGTCCGGAAAAACTCATATCTCGTGTTACTGAAGAAGAGGGAAAGAATAATGCACAACAGTCATGGAATGAACCCACTACTAGACGAATGCCAATACCCAGTGAAGGTCCTGCTAAATGGAATTCATCATTCCAACCATCAAGGGCCCTTGAGGATGATGCATCTTCTTTTGCCTTAAGACACAAAACTCAAACACAGGAACAAATGTTAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGTAATATGCAAGTGAAAAGAGTATCATCATCTGCTGGCACCGTGAGTGGGACTAAAGACTTTGTTGCTTTAAATAGAAGCCTAAGTGGTCGAACGAGAATGAGATCACCCACCAAAATGGATAGTTCCAAATTTGACCTTGAGAAAAAACCTTGTAATAGACAGCATAATTCCTTGTCTCATTTAAGGACGTTAGAGAGGAAGAGAAGGACCCCAAATGTTACACAACTTGAAAGCACGTCTTCTGTTAATTCAGTTGGTGTGAAACAGAGAAATCTTCGTTCTGCTGCACTGGGTGGAAAAAGGAGGGACTTCAACTCTTCCTCCATGAACAGTTCTAATGTCAAAAATAAACGAGATGGTCAGGGAGAAACAAATAAGGTTAATGAGAATAAGATCAATGATGTAGTTTCATTCACGTTTAATTCCCCCTTGAAGCAAAAGATAGGAGTACCTGCTGAGAAGGAAGAGACAAGCAGTGACAATGAGAGGAAGACATATTTCCAAAGACCTTCACCCTTGAAAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAAGAATTAACCTCTCAAGAAAATGAAGAGTCGGCTATTGATCCTCTACATAAAAAATCAAGTACCATGATTCTTCAAGAGCTGATATCTGCCTTAAGTTCAGAGCATTTAATCTGTCATGATAGTCATATGTTTAATGAAAACATTGGTTTCCACGACGGGGCAAAACAAGAAAGGCTATTAGGAACCTTTTTCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGACTTCACCCTGACTCCATGAGTTACTCCAATGGTCAACATGAACAATTGGAACATGATACAGAACTTTTAGATTCTGCAACATCGTTTAACAAAGTAAGGATAGGTGAGATCTTGATCGATCTTGTCAACCAAATTCCTTTGGCACTACAATGTTTTCTTTCTTTTGGGACACAATTGACAAGAAGCAAGCTCAACAACATGAAGGATGTTCTCTTGAATGCTGAATTGGTGCTTGGAATTGCAAGTGACCACAATGAGGATGAAGTGTCACAACTTTTAATTTATCAGTTTCTCCTTGATGAATTGGACAGTATGGCAGGTGATGATGCTTTGTGGACAGATTTTAATGGCTTTATGAGTAGTGAGGATTCTAAACATAGAAAGGCACTCAAGGGATTTCTCTTTGATTGTGTTATGGAATATCTAGAATCAAATTGTTGCCAATATTTTTACTCTGGATTCAAGGCATGGACAAAGCTACCATTATGCATAAAAGCTGAGATGTTAGCTCAAGAGGTTAAGAGGGAGATCAAGAAATGGGCATGTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAGATGAGCCACTCCCTTGGGAAATGGACTAACTTTGATGTTGAAGCATTTGAGGCTGGAGTTGATTTAGATGGGGGCATACTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGGTTGCAAGTGGAGCTGTATTTCCTTATAA 3021 0.4052 MLCSWSIIFAVLLDAYDLHQRLLSESVLSWVAQGFCRVVLILFWITLLVAEMNDSTVNNLAIVEKKVQKPGGCVGIFFQLIDWKRRLAKKKLFSKKLLPPARAKKFRADEKMPNSKLHLIANENSGGFPSAKKSGNHGVDVEQKSEMRVPSLVARLMGLESIPASQRDKSKKASSSDSYGDGKESLADHCELDRQGVDLEMGVVKHDSRPQKLQKTGAYERRAVTRFGAEALHMRSVFSRAKRYNHHHHHHPKLASPLKSPRISSGKSASRSSRLIGAATKILEPGLLQARSRAKGSLQNHASMHPPKTGTVTNGVGNRSEVMQNQSCHDASTAKSLMGQASCKNCGNLLDVIDCRPEIGGHTAVPPPVVSDMINATSMVSSQKKGKSFTPSNGQERDIVLLRSPEKLISRVTEEEGKNNAQQSWNEPTTRRMPIPSEGPAKWNSSFQPSRALEDDASSFALRHKTQTQEQMLSSERYSSGSTMSNMQVKRVSSSAGTVSGTKDFVALNRSLSGRTRMRSPTKMDSSKFDLEKKPCNRQHNSLSHLRTLERKRRTPNVTQLESTSSVNSVGVKQRNLRSAALGGKRRDFNSSSMNSSNVKNKRDGQGETNKVNENKINDVVSFTFNSPLKQKIGVPAEKEETSSDNERKTYFQRPSPLKVDALGAFLEQKLKELTSQENEESAIDPLHKKSSTMILQELISALSSEHLICHDSHMFNENIGFHDGAKQERLLGTFFNGNHLSPGSVLEASFSSSSLDESSGHGLHPDSMSYSNGQHEQLEHDTELLDSATSFNKVRIGEILIDLVNQIPLALQCFLSFGTQLTRSKLNNMKDVLLNAELVLGIASDHNEDEVSQLLIYQFLLDELDSMAGDDALWTDFNGFMSSEDSKHRKALKGFLFDCVMEYLESNCCQYFYSGFKAWTKLPLCIKAEMLAQEVKREIKKWACMVGMVPDEIIEWEMSHSLGKWTNFDVEAFEAGVDLDGGILQILVDEIVEDLVGCKWSCISL* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00092 1006 MobiDBLite consensus disorder prediction 160 185 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 415 431 - -
Rops8g00092 1006 Pfam DUF761-associated sequence motif 142 168 IPR032795 -
Rops8g00092 1006 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 60 995 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 752 775 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 510 614 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 414 445 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 165 185 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 558 575 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 521 557 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 465 498 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 244 271 - -
Rops8g00092 1006 MobiDBLite consensus disorder prediction 586 603 - -
Rops8g00092 1006 Pfam Domain of unknown function (DUF4378) 831 991 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00092 Rops-Chr8 2405902 2411091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00092 48 996 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.682 2.87e-84 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00092 - - aprc:113861902 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00092 8 2405902 2411091 Rops8g00092 8 2405902 2411091 ECH