Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00086 ATGTACACTTCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCCACTGAATTTGAGGAGACAGTTGGACAGTACCTATTTGATTTGGAGAACACAAATCAGGAACTGAAAAGTGACTTGAAAGATCTCTACATAAACCAAGCAATTCAAATAGATGTGTCTGGGGATCGCAAGGCTGTAGTCATCTATGTGCCTTACAGATTAAGAAAGGCATTCCGCAAAATTCATCTTCGTCTTGTCAGAGAGCTGGAGAAGAAGTTTAGTGGGAAGGATGTTGTCTTGATTGCCACAAGAAGGATCCTGAGGCCTCCAAAGAAAGGGTCAGCTGTTCAGCGACCCCCAACCCGCACTTTAACTGCTGTCCATGATGCTATGCTGGAGGATGTAGTGTATCCAGCAGAGATTGTTGGCAAACGAGTCAGATATAGAATTGATGGATCAAAAATAATCAAGGTTTTCTTGGACCCCAAGGAGCGCAATAATACTGAATACAAGCTGGAGACCTTTTCTAGAGTTTACAGGAAGCTTACAGGGAAAGATGTAGTTTTCGAGTATCCTATCACAGAAGTCTGA 576 0.4288 MYTSRKKIHKDKDAEPTEFEETVGQYLFDLENTNQELKSDLKDLYINQAIQIDVSGDRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPPTRTLTAVHDAMLEDVVYPAEIVGKRVRYRIDGSKIIKVFLDPKERNNTEYKLETFSRVYRKLTGKDVVFEYPITEV* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00086 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops8g00086 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops8g00086 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Rops8g00086 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00086 Rops-Chr8 2178248 2180124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00086 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 3.13e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00086 K02993 - gmx:100305484 358.221