Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00073 ATGGCTTTCACTTGCCCTTCACTCGTGGACAAGAAGAAGGTCCTCTTCATATTGGGTGCAACTGGCACAGGAAAATCCAAACTTTCCATCAAATTGGGCACTCAATTCTCTTCTGAAATCATCAACTCTGACAAAATCCAAGTATACAAGGGCCTTGACATTGTCACCAACAAGATACCAGAGCCTGAACGTTGTGCCATTCCACATCACATGCTAGGCATCATCGATGACCCTAATTATGACTACACTGTCAATGAGTTCTGCGAGCACGTGCTTGAAGCTCTTGATCTCATCATTGAAAATGGACACCTACCCATTATTGTGGGAGGGTCCAATTCTTACATAGAAGCATTACTTGAGGACCCCAACATTGCATTTCGTTCAAAATATGATTGTTGTTTCATTTGGCTTGATGTGTCTTTGTCTATTTTGTTTCAATATCTAGACAAAAGAGTGGATGAAATGCTTGATGCAGGGCTTGTGGATGAGATCAGAAAATTTTTTGTGCCTGGAGCAAACTATTCTTGTGGGATTAGAAGAGCCATTGGGGTTCCTGAGCTGGGAGAGTATTTAATGATGGAAAAGGAAATATATGATGAGGCTCAAAAGGAAAAGATGTTGAAAGATGCCATCAAAAGAACTAAGGAAAACACTTGGAAATTAGCTGAATGTCAACTCTTGAAGATTCATAGGATGAACTATGAGCTTGGATGGAGGATCACAAGAATTGATTCTACAAAGGTGTTTGAGGCTCTTTTAAGAGGAGAAGATTGTGAGCATTTGTATCAAGAGATTGTTTTCAAGCCAAGTGTGGAGATAGTGCAAAAATTTCTGGAGGAGACAGCTGAGGGATGTGAGAAGACAGATTGGAATTGA 876 0.4041 MAFTCPSLVDKKKVLFILGATGTGKSKLSIKLGTQFSSEIINSDKIQVYKGLDIVTNKIPEPERCAIPHHMLGIIDDPNYDYTVNEFCEHVLEALDLIIENGHLPIIVGGSNSYIEALLEDPNIAFRSKYDCCFIWLDVSLSILFQYLDKRVDEMLDAGLVDEIRKFFVPGANYSCGIRRAIGVPELGEYLMMEKEIYDEAQKEKMLKDAIKRTKENTWKLAECQLLKIHRMNYELGWRITRIDSTKVFEALLRGEDCEHLYQEIVFKPSVEIVQKFLEETAEGCEKTDWN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00073 291 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 240 - -
Rops8g00073 291 FunFam Adenylate isopentenyltransferase 5, chloroplastic 141 240 - -
Rops8g00073 291 Pfam IPP transferase 128 226 - -
Rops8g00073 291 Pfam IPP transferase 47 121 - -
Rops8g00073 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 170 IPR027417 -
Rops8g00073 291 Gene3D - 11 278 IPR027417 -
Rops8g00073 291 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 278 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00073 Rops-Chr8 1914809 1915684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00073 78 288 C2H2 Transcription Factor Family AT2G27760 30.252 1.08e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00073 K10760 - gmx:121173984 459.914