Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00065 ATGGCTGCCATTTCACTTAGGCATAACCCACAAGTGAACAACACTCATCAGCAAAGGGGAGTCATCAGTGAAGAAATTGAAGGACTCATAAGAGTTCATAGAGATGGACGTGTTGAAAGGCCATCAATTGTGCCTAATGTCTCATGCACTGTGGCATCAGAACGTGGTGTCACTGCAAGAGATGTTGTAATCAATAAAGAGACCAATTTATGGGCACGTGTTTATGTGCCATTAAGCAGTCATGGCAAGCTTCCTTTGCTTGTTTACTTCCATGGTGGTGGATTCTGTGTCGGATCTGCTGCTTGGAGCTGTTACCATGAGTTCTTGACCAATCTTGCTTCCAAATCAAATTGTGTACTTGTTTCTGTAGAATACCATTTAGCTCCTGAGAACCGTCTTCCTGCTGCTTATGATGATGGTTTCAATGCTCTCATGTGGGTGAAAAGAGAAGCTCTAAATGGCTCAAGTGTGCAAAAATGGTGGCTGAGTCATTGCAACCTATCTTGCTTGTTCCTAGCTGGTGACAGTGCAGGGGCTAATATAGCTTACAATGTAGCCACACGCATAGGATCAAGTATCTTGAATCCATTATCTCTCAAGGGTGTCATCTTGATCCAACCTTTCTTTGGAGGAGAGGAAAGAACTAGCTCTGAGAAGCATTCCCATCAGCCACCAAATTCAGCTCTCACTTTATCAGTTTCTGACACCTATTGGCGCTTGGCACTTCCTCTTGGAGCTAACCGTGACCATTCATATTGCAACCCTCTTGCATATGGGGCCAAGTTTAGAGATCTGAGGCTTCCATCCATTATGGTATGTGTTTCAGAAATGGATATCCTCAAAGACAGAAACTTGGAGTTCTCAAACACTTTAGCAAAAGCAGGGAAAAGGGTTGAAACATTTGTCTACAAAGGTGTAGGGCATGCATTCCAAGTGCTGCATAATTATCAGCTTTCCCATTCTCGGACCCAAGAAATAATATCTCATATCAGGAACTTCATGAACCAGTAA 1011 0.4313 MAAISLRHNPQVNNTHQQRGVISEEIEGLIRVHRDGRVERPSIVPNVSCTVASERGVTARDVVINKETNLWARVYVPLSSHGKLPLLVYFHGGGFCVGSAAWSCYHEFLTNLASKSNCVLVSVEYHLAPENRLPAAYDDGFNALMWVKREALNGSSVQKWWLSHCNLSCLFLAGDSAGANIAYNVATRIGSSILNPLSLKGVILIQPFFGGEERTSSEKHSHQPPNSALTLSVSDTYWRLALPLGANRDHSYCNPLAYGAKFRDLRLPSIMVCVSEMDILKDRNLEFSNTLAKAGKRVETFVYKGVGHAFQVLHNYQLSHSRTQEIISHIRNFMNQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00065 336 Gene3D alpha/beta hydrolase 13 335 IPR029058 -
Rops8g00065 336 PANTHER ARYLACETAMIDE DEACETYLASE 26 314 - -
Rops8g00065 336 Pfam alpha/beta hydrolase fold 87 311 IPR013094 GO:0016787
Rops8g00065 336 SUPERFAMILY alpha/beta-Hydrolases 28 336 IPR029058 -
Rops8g00065 336 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 170 182 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00065 Rops-Chr8 1751791 1752801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00065 1 335 Carbohydrate Esterase AT5G16080 54.755 7.33e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00065 - - gmx:100819429 587.03