Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00060 ATGGCAGCTACGGATTCTTCATCTCGTGAGGAGAATGTTTACATGGCGAAGTTGGCGGAGCAGGCTGAGAGGTATGAGGAAATGGTTGAGTTCATGGAGAAGGTTGCAAAAACGGCGGATGTTGAGGAATTAACTGTGGAGGAGAGGAATCTTCTCTCTGTTGCTTACAAGAATGTGATTGGAGCAAGGAGGGCCTCTTGGAGGATCATTTCCTCCATTGAACAGAAGGAGGAGAGTAGAGGAAATGAGGAACATGTTTCTGTTATTAAGGAGTATAGGGGAAAGATTGAGACTGAACTTAGCAAAATCTGTGATGGGATTTTGAGCCTCCTTGACTCTAATCTTATCCCATCTGCAGCATCCGCTGAGTCTAAAGTGTTTTACCTTAAAATGAAGGGTGACTATCATAGGTACCTTGCTGAGTTTAAGACGGGGGCAGAGAGAAAAGAAGCTGCCGAGAGTACTTTGTTGGCTTACAAATCCGCTCAGGATATTGCTCTTGCTGACCTGGCCCCCACCCACCCTATTAGGCTGGGTCTTGCACTCAACTTTTCTGTGTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTTGCCAAGCAGGCATTTGATGAGGCAATTTCCGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGACAATCTGACTTTGTGGACGTCTGATATCACGGATGATGCCGGAGATGAGATCAAGGAAACATCTAAGCAACAATCAGAAGATGGCCAGCAGCAGTAA 795 0.4541 MAATDSSSREENVYMAKLAEQAERYEEMVEFMEKVAKTADVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVSVIKEYRGKIETELSKICDGILSLLDSNLIPSAASAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKQQSEDGQQQ* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00060 264 SMART 1433_4 9 252 IPR023410 -
Rops8g00060 264 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Rops8g00060 264 Pfam 14-3-3 protein 15 239 IPR023410 -
Rops8g00060 264 SUPERFAMILY 14-3-3 protein 8 241 IPR036815 -
Rops8g00060 264 Coils Coil 15 35 - -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Rops8g00060 264 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Rops8g00060 264 FunFam 14-3-3 protein epsilon 5 252 - -
Rops8g00060 264 Gene3D - 1 252 IPR036815 -
Rops8g00060 264 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Rops8g00060 264 PIRSF 14-3-3 3 251 IPR000308 -
Rops8g00060 264 PANTHER 14-3-3 PROTEIN 9 243 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00060 Rops-Chr8 1683729 1686499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00060 6 262 14-3-3 family AT3G02520 89.922 2.17e-173 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00060 K06630 - csin:114285823 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00060 8 1683729 1686499 Rops8g00060 8 1683729 1686499 ECH