Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00043 ATGGCCACGTCAGAAGCTATGGATCAATTCGATGAATCCATGAAGAAGCAAATAGCATCACTTATGCGGGCTATGCTTTTAGTTAAATCCCTCAAAGAGGATAATACTCCTTGTAAAGTTGACGAGGGTCTCTTTTTGGGTTCGGCTGGCACTGCAGCTAACAAGGATGGTTTGAAAAATGAGAATGTTACTCACATTTTGACAGCGGCTGGTAAATTGGCACCTGCACATCCCGGGGATTTTGTCTACAAAATCATAGATGTTGCTGACAGAGAAGACACCAACTTAAAACAATACTTCGATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACAAGGTGGAGCTGTTCTGGTTCATTGTTATGCTAGAAGATCAAGGAGTGTGACTATCATTATAGCATATCTGATGAAGACTTGTGGAATGAGCTTTTCTGGAGCTCTGGAACATGTAAAGAGCAAACGACCATAA 471 0.4076 MATSEAMDQFDESMKKQIASLMRAMLLVKSLKEDNTPCKVDEGLFLGSAGTAANKDGLKNENVTHILTAAGKLAPAHPGDFVYKIIDVADREDTNLKQYFDECFDFIDEAKRQGGAVLVHCYARRSRSVTIIIAYLMKTCGMSFSGALEHVKSKRP* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00043 156 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 156 IPR029021 -
Rops8g00043 156 Gene3D Protein tyrosine phosphatase superfamily 10 156 IPR029021 -
Rops8g00043 156 Pfam Dual specificity phosphatase, catalytic domain 44 156 IPR000340 GO:0008138|GO:0016311
Rops8g00043 156 CDD DSP 37 156 - -
Rops8g00043 156 SMART dsp_5 36 156 IPR020422 GO:0006470|GO:0008138
Rops8g00043 156 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 97 156 IPR000387 GO:0016311|GO:0016791
Rops8g00043 156 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 31 156 - -
Rops8g00043 156 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 156 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00043 Rops-Chr8 868426 868896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00043 6 135 Protein tyrosine phosphatase (PTP) family AT3G23610 51.538 1.12e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00043 - - lang:109352945 241.506