Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00001 ATGGGTATCTGGGATTACAAATTCTTTCTTGGGGTTTCATCTATCTTCTGGTTGATATGGGTTTCATCTGGAGATGTTCCAGATGACAACATTCTGATAGACTGTGGATCCCCCAACAATACTCAGGTGGGGGCTCGCTTATTTCAAGCTGATAATTCTTCTTCCCACTTGCTTTCAACTTCAGAGTTTATTTTGGCAAAGGTAAATTTCACCCCAATTCCATCATCTTTTGATTCTGACCTGTACCAGACTGCTCGAATCCTTAAAAGTGTTTCTCGATACACATTCCCAATCAAAAAACAAGGAAGGCACTGGATTCGCTTGTATTTCTTCCCTTTTAGTTTTGGAAATTACAATATGAGCACTGCAAAATTCTCTGTTTCTGCTCAAAGCACCACACTGCTCAACGACTTTCAAATAGACAGTGGTTTTTTACTGAAAGAATACTCTTTGAACATAACTGATAGCCAACTCTTGGTCACTTTTTCCCCTTCTTTTAGTTCATTTGCCTTTATAAATGCCATAGAAGTTTTATCCATCCCTGACAAGGTTATTCCTGAGCATGTTAGCATTGTCAGTCCACATGGGGATGATAAGGTTCTGTGGATGAAGGCATTTGAGACTGTTGCCAGGGTAAATATGGGTAACCAAACAGTGTCTCCCCTTAATGATACTATGGGGCGTCTATGGGTCTCAGATAATATATATCTTATACACAATAATCTTGTGGATTTCGTATCCAAAATTGAATCAGTCGATTTCAAAGAAACAACCATTACTGAATATATTGCTCCATCTATGGTGTACGGGACTCTGACTAGATTGAGAACAGGTTCAGATCCCCGAACAAATGCTAATGTGACATGGCTTTTTGATGTTGATCCCGGCTTTGATTATCTTGTTCGCTTTCATTACTGTGACATTGTGAACCTACCCCCAAACACTCTCTTCAACGTTTATGTTAACTCTTGGCTTGTTTCTACAGTTGATCTTAGCAAAGAAACATCAAATAAATTTGGTGCGCCATATTATATGGATGCCATCACTAGCACTAGTGGCAGCCGTAGTTTAAATGTTAGTGTTGGTACTTTTAGTGTAGGTGAAGCATCTTCCCCAGAGGCCATTCTCAATGGGCTGGAGATCATGAAAGTCAGTAACTCTAAAGATAGCCTGGTCTTAGATTCAGAGAGAAGTGCCAAGACAAAAATGGGTATCATAGTGGGTCAAGTGACTGGATCTGTGGTTGGTTTTTTGGCTATGGTGATGGCTTTACTTCTGCTTTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGTCTCCACATCGGTCATGAAACGCGCGACCATTTTTCTGTTAAGAAAGTGGCTAATGACAATTATGATGGAACTGCGATTTTTTCAAGCTCAAAAATTGGGTATCGGTTGCCTCTTGCACTAATTCAAGAGGCAACTAATAATTTCAGTGAAGATTTGGTCATTGGTGCTGGTGGTTTTGGGAAGGTTTACAAGGGAGTTTTCAAAGATGAAACAAAGGTAGCTGTGAAAAGAGGGTCATGCCAATCTCAACAAGGTCTTGCTGAGTTTCGGACTGAAATTGAAATGTTATCACAGTTTCGCCATCGCCATTTAGTATCATTGATTGGGTACTGTAATGAACAACATGAGAGGATCATTATTTACGAGTACATGGAAAAAGGGAGTCTGAAGAACCGTCTGTTTGGATCAGATACACATGCATCCTGCTTAAGTTGGAGGCAGAGGCTTGAGATTTGCATTGGAGCAGCCAAAGGACTACATTATCTTCACACTGGCTCTGACAACACAATTATTCACCGTGATGTCAAATCAGCAAATATCCTGCTGGATGAAAATTTCATGGCTAAAGTTGCTGATTTTGGTCTTTCAAAGACTGGTCCAGAGATTGATAAGAGACATGTCAGTACAGCAGTGAAAGGAAGCTTTGGCTATCTTGATCCAGAATACTTAATAATGCAGCAGCTGACAGAAAAATCAGATGTTTACTCTTTTGGGGTGGTCATGTTTGAAGTCCTTTGTGGGAGACCAGTAATTGACCCATCACTCCCAAGGGAAAAGGTGAATCTGGTGGAATGGTTGATGAAATGGCAGGAGAAAAGCACAATAGGGGAACTTCTAGATAGTCGCCTTGCAGCTGCAGGTCAGATAAAGTCAGAGTCACTCCACGCATTCGTAGAGATTGCCAGAAAGTGCTTGGCTGAACATGGCATCAACCGGCCTAGCATGGGAGATGTGTTGTGGCACCTGGAATGTGCTTTGCGACTAGAAGGTGTTGATGAGAGATCCAATAATGCTGGTGATGTGTCCTCCCAAATGTATCGCTCAGATACTGGATTATCTTCTTCGGAATACAGTATGGGAAGCGTAGGTGACCTAGCTGGTGTTTCAATGAGCAAGGTGTTTGCCCGAATGGTGACAGAGGATATGCGGTAG 2469 0.4143 MGIWDYKFFLGVSSIFWLIWVSSGDVPDDNILIDCGSPNNTQVGARLFQADNSSSHLLSTSEFILAKVNFTPIPSSFDSDLYQTARILKSVSRYTFPIKKQGRHWIRLYFFPFSFGNYNMSTAKFSVSAQSTTLLNDFQIDSGFLLKEYSLNITDSQLLVTFSPSFSSFAFINAIEVLSIPDKVIPEHVSIVSPHGDDKVLWMKAFETVARVNMGNQTVSPLNDTMGRLWVSDNIYLIHNNLVDFVSKIESVDFKETTITEYIAPSMVYGTLTRLRTGSDPRTNANVTWLFDVDPGFDYLVRFHYCDIVNLPPNTLFNVYVNSWLVSTVDLSKETSNKFGAPYYMDAITSTSGSRSLNVSVGTFSVGEASSPEAILNGLEIMKVSNSKDSLVLDSERSAKTKMGIIVGQVTGSVVGFLAMVMALLLLCRRRRRRRRRNSLHIGHETRDHFSVKKVANDNYDGTAIFSSSKIGYRLPLALIQEATNNFSEDLVIGAGGFGKVYKGVFKDETKVAVKRGSCQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCNEQHERIIIYEYMEKGSLKNRLFGSDTHASCLSWRQRLEICIGAAKGLHYLHTGSDNTIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKRHVSTAVKGSFGYLDPEYLIMQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLVEWLMKWQEKSTIGELLDSRLAAAGQIKSESLHAFVEIARKCLAEHGINRPSMGDVLWHLECALRLEGVDERSNNAGDVSSQMYRSDTGLSSSEYSMGSVGDLAGVSMSKVFARMVTEDMR* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00001 822 SUPERFAMILY Protein kinase-like (PK-like) 464 762 IPR011009 -
Rops8g00001 822 Gene3D - 30 180 - -
Rops8g00001 822 Gene3D - 205 386 - -
Rops8g00001 822 Gene3D Phosphorylase Kinase; domain 1 448 562 - -
Rops8g00001 822 PANTHER OS07G0166700 PROTEIN 474 768 IPR045272 GO:0004714|GO:0006468
Rops8g00001 822 Pfam Protein tyrosine and serine/threonine kinase 492 757 IPR001245 GO:0004672|GO:0006468
Rops8g00001 822 FunFam Receptor-like protein kinase FERONIA 563 783 - -
Rops8g00001 822 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Rops8g00001 822 FunFam Receptor-like protein kinase FERONIA 205 386 - -
Rops8g00001 822 CDD STKc_IRAK 493 762 - -
Rops8g00001 822 FunFam Putative receptor-like protein kinase 30 181 - -
Rops8g00001 822 SMART serkin_6 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00001 822 FunFam receptor-like protein kinase FERONIA 452 562 - -
Rops8g00001 822 ProSiteProfiles Protein kinase domain profile. 487 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00001 822 Gene3D Transferase(Phosphotransferase) domain 1 563 784 - -
Rops8g00001 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Rops8g00001 822 Pfam Malectin-like domain 33 384 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00001 Rops-Chr8 18504 21958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00001 1 822 Receptor kinase-like Gene Family AT3G46290 50.708 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00001 Malectin_like 6.1e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00001 - - lang:109328391 1158.67