Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02568 ATGATTGGGATTGCTTTCACAGGCTCTGGAAAAACTCTGGTCTTTGTGCTGCCCATTATCATGGTGGCAATGCAGGAGGAAATTATGATGCCTATAGTTCCTGGAGAAGGACCATTTGGTTTGATTATTTGTCCATCAACGGAACTGGCTAGGCAAACTTATGATGTGGTTGAACAATTCCTGATACCATTGAAGGAAGCTGGATATCCAGAGCTGAGGCCTCTGCTTTGTATTGGTGGAGTGGACATGAGATCGCAGCTTGAGATTGTGAAGAAGGGAGTTCATATTGTTGTTGCCACTCCTGGGAGGTTGAAGGATATGTTGGCCAAGAAGAACATGAATCTTGATAACTGTAGGTATTTAACATTAGATGAGGCTGATCGATTGGTGTGGAAGCGGTGGTACATTCATGGAGGCAAGGATCGGGAACAGAGAGAGTATGCCATTGCAGCTTTTAAAGCTGGAAAGAAAGATGTGTTGGTTGCAACCGATGTTGCATCCAAAGGTTTGGATTTTCCTGATATTCACATGTCATTAACTATGACATGCCAAATTGAAATTGAAAATTATGTCCATAGGATTGGACGGATGGAAGATGTGGCAAGACCGGCGATTTTTCAGGAGCGGATGCCTTCTGCTCTGATAGATGTAAAAGGGGCTGCAGTTTGGCTCTTTGGCTTTGATGAAGCCGTGCCTTAG 699 0.4406 MIGIAFTGSGKTLVFVLPIIMVAMQEEIMMPIVPGEGPFGLIICPSTELARQTYDVVEQFLIPLKEAGYPELRPLLCIGGVDMRSQLEIVKKGVHIVVATPGRLKDMLAKKNMNLDNCRYLTLDEADRLVWKRWYIHGGKDREQREYAIAAFKAGKKDVLVATDVASKGLDFPDIHMSLTMTCQIEIENYVHRIGRMEDVARPAIFQERMPSALIDVKGAAVWLFGFDEAVP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02568 232 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 129 IPR014001 -
Rops7g02568 232 SMART helicmild6 124 198 IPR001650 -
Rops7g02568 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 130 IPR027417 -
Rops7g02568 232 Pfam DEAD/DEAH box helicase 2 130 IPR011545 GO:0003676|GO:0005524
Rops7g02568 232 Gene3D - 1 136 IPR027417 -
Rops7g02568 232 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 132 199 - -
Rops7g02568 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 196 IPR027417 -
Rops7g02568 232 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 56 232 IPR001650 -
Rops7g02568 232 SMART ultradead3 1 218 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02568 Rops-Chr7 48318216 48319978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02568 137 205 Eukaryotic Initiation Factors Gene Family AT3G13920 30.435 6.04e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02568 K13116 - gmx:100814127 249.98