Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02562 ATGCATTCTGTCACAAGTGCCTCCTTTTGGCCATCCACTCTCACACTCTCCCCCTGCAAGAATTCATGTGGTGCTTACAAAGTTCAATCCATTGACTCCATGGTAATATATGACCCTGCAGGTCACGCCTTCCATTCTGCTGCTCTTAAACTTCTTGGTGTCCAGGAAGATAATAGGGATGCTGACAATAAAAAATGGTTAATGATAAGGAACAGACTTATTTCCCATCATCCGATTCCTATAGCAGCAAGAGCAAAAAGAAATCTGCTTCTGGAGACAAGCAAAGAAGATCACTATGCCTTATCGGGTCCGAGCAATCTAAGCTCTTCTTCTTCGAGGAAACTGAAGCTGCGAAGGTGCAAAAAGGATGAAATAGAAAGTCACTTTAAGACAATTCAGGGAGTATATGAAGTGTTGATCGATCCTGTGAAGAGAAGAATTTATGATTCTATAGATGAGTTTGATGATGAGATTCCCACCGACTGTGCACCACAAGATTTCTTCAAGGTGTTTGGCCCTGCTTTTATGAGGAATGGCCGGTGGTCAGTTAATCAACCAATTCCACCACTAGGGGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTATTCATTCAAAAGCTGGAGAGAGTTTCCCCATGCCGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAACTGA 729 0.4198 MHSVTSASFWPSTLTLSPCKNSCGAYKVQSIDSMVIYDPAGHAFHSAALKLLGVQEDNRDADNKKWLMIRNRLISHHPIPIAARAKRNLLLETSKEDHYALSGPSNLSSSSSRKLKLRRCKKDEIESHFKTIQGVYEVLIDPVKRRIYDSIDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPPLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02562 242 Gene3D DnaJ domain 46 153 IPR036869 -
Rops7g02562 242 SUPERFAMILY Chaperone J-domain 123 176 IPR036869 -
Rops7g02562 242 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Rops7g02562 242 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 35 241 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02562 Rops-Chr7 48112050 48112850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02562 98 240 C2H2 Transcription Factor Family AT1G74250 26.396 4.97e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02562 K09522 - gmx:100806665 290.426