Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02513 ATGGGTTCTACTACTTGCATCTGCATAGATAAGACAGGGACTTTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGCGGAAAGGCCATGAAGATGAAAGGTAATGACAGTGCAGACAAACTGGAAACAGAGATGTCTGAAGAAGTTCTAAGCATTCTTTTGCAAGCTATATTTCAAAATACTTCATCAGAAGTAGTTAAGGACAAATATGGAAATAGGACAATATTGGGAACACCAACAGAATCAACAGTATTGGAATTTGGATTGCTTTCAGGTGGTGATTTTGATGCCCAACGTAGAGACTATAAGATACTTAAGTTGGAACCTTTCAATAACATAAAATAA 351 0.359 MGSTTCICIDKTGTLTTNHMVVNKIWICGKAMKMKGNDSADKLETEMSEEVLSILLQAIFQNTSSEVVKDKYGNRTILGTPTESTVLEFGLLSGGDFDAQRRDYKILKLEPFNNIK* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02513 116 ProSitePatterns E1-E2 ATPases phosphorylation site. 10 16 IPR018303 -
Rops7g02513 116 Gene3D - 18 114 IPR023299 GO:0000166
Rops7g02513 116 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 14 114 IPR023299 GO:0000166
Rops7g02513 116 Gene3D - 5 17 IPR023214 -
Rops7g02513 116 PANTHER CATION TRANSPORTING ATPASE 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02513 Rops-Chr7 46474729 46475079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02513 1 116 Primary Pumps ATPases AT3G57330 62.931 2.53e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02513 K01537 - gmx:100791934 192.2