Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02506 ATGTCAGAATCTCCTCCCCCTAAGCGCTTCAAAATCACCAGGGGGGAAGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTCGTAATTTCATGACCTTTGATTATTTAAAATGTAAACCAGGGCCTCGATTAAATCTTGTAATTGGGCCCAATGGTTCTGGAAAAAGTTCTCTTGTGTGCGCTATCGCTCTTGGCCTCTGCGGAGAGCCCCAGTTGCTTGGGCGAGCCACGAGTATCGGGGCATATGTGAAGCGGGGAGAAGAGTCCGGCTACATTAAGATTACCTTAAGAGGGGACCATAAAGAGGAGCACATTACCATTATGCGTAAAATAAATACTAACAATAAGTCTGAGTGGTTGTTCAATGGAAATGTAGTGCCCAAAAAGGATGTGATTGAAACCATTCAAAGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTGCCGCAAGACAGGGTCTGCGAGTTTGCCAAGTTAACTCCTGTGCAACTTCTGGAAGAGACTGAAAAGGCTGTTGGTGATCCACAGCTTCCAGAGCAACATCGTGCACTAGTTGATAAAAGTCGTGCATTGAAGCATATTGAGCTGTCTCTCGAGAAAAATGAAGGAACTCTAAATCAGTTGAAGGAACGTAATGCTGAATTAGAGAAGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTGCCAAGGCCGAATCAATGAAAAAGAAATTGCCATGGCTGAGGTATGATATGCAGCAGGCAGAATATTGGGAAGCTAAGGAGCGTCAGAATGATGCCGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCTATTAAGAAACAAAAAGAGGAGAAGGCTGCATTAGATGCAAAATGTAAAAAGGTAAGCAGCCACATAAATGAGAATACCAAGAAGCGAATGGAACTTGTGGAGAAAGAGAACCGATTGGATGTGGAATTACAAGGAAAATACAAAGATATGGAAGAGTTGAGGAGGCGGGAAGAAACTCGGCAACAAAGACTTATAAAAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAGAGTCTACACCCTTATGTACCTCCCAGGGATGAGATACAAAGACTCAGAGCTGAAATTGTGGATTTGGATTCTTCTGCTAATCAAGCGAGGCAGAATAAGTCACAAGCAGAAAATGAAATAAAGCGTAAAAAGTCATCCATGATGCAGTGTAAAGAGAGATTGATGGAAATGAATAATAAAAGTACCAAGTGTTTGCATGTATTGCAAAGGTCTGGGGTTGAAAAATTTTTTGAAGCTTATAAATGGGTCCAAGAACATCGCCATGAATTCAACAAGGAGGTTTATGGCCCAGTTTTAGTTGAGGTGAATGTCTCAAACAGGGTTCATGCTGCATATCTGGAGGGTCAAGTAAATTATTACATTTGGAAGTCTTTCATAACACAAGATTCTGGTGATCGGGACTTTTTGGCGAAACACTTGCAGTTCTTTGAAGTCCCAGTTATAAATTATACTGGTGGTGATGGCCACGAAAGAGAGCCTTTGGAAATTTCCGAAGAAATGCGTACTCTTGGTATCTACTCCCGGTTGGACCAAATTTTTGATGCTCCAGTTGCTGTCAAGGAAGTTTTGATTAGCCAGTTTAATCTAGAGCATTCATATATTGGATCCAAAGAAACTGATCAGAAGGCTAATGAGGTCCCAAAATTGGGAGTTACAGATTTATGGACTCCAGAAAATCACTACCGTTGGTCTAAGTCTAGATATGGAAATCATGTTTCAGCAGTTGTTAATCAAGTGGAACGCCCACAACTTTTATTGAATAATTTGAATGTGGGAGAAATTGAGAAGCTGAGTTCCCAGCTAAGGGAGCTTCAAGAACTCGTTGATACCTTGGAGGAAAGTGTTAAAAGGTTTCAAGATGAGGAAAGAAACTTAGTGAATCAAGCTGCTAAACTTCGTAAACAATGGGAGAGCTTTAGTATTACAGCACAGAATGAGCAAAAAAAACGTCAAGCAATTGTTTGCCGAATTGAACAAAGGAAAGGGATACTAAAATCGATGGAGGAGCAGGATGATGTTGATACTGAGATAGCAAAGCTTGTTGATCAGGCTACAAAATGTAACATTCAGCGATTCCATAATGCAATTAAAATTAAGGATCTTCTTGTTGATGCTGTGGGTTACAGACGGAGTTTTGTTGAACAACGTATGGCTGTCATTGAATTTGATTCAAAGATCGGAGAAATGGAGGCCAATCTGAAGCAGCATGAGAATTCTGCTGTGCAAGCATCATTGCATTTTGATAACTGTAAGAAAGAGGCTGAGAATTGTAGACAGAAACTTATAGATTCCTTGAACTATGCTAAATCAATTGCTCGGCTTACACCTGAACTAGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAGTTGGAAGCAGCTATCCAAGATATCACTTCTCAAGCCAATTCAATCCTTTTTGTCAATCATAACATATTGGAACAATACGAAGATCGTCGAAGACAGATAGAAGATCTTGCAGCAAAACTAGAAGCAGACAAGAAGGAATCTAGAAAGGGTCTGGCTGAATTAGATAACATTAAGGGAAAATGGCTTCCAACACTGAGAAACCTTGTGGCCCAGATAAATGAAACTTTTAGTCATAATTTTCAAGAGATGGCCATAGCCGGAGAAGTTTCACTAGATGAGCATGCTATGGACTTTGATCAATTTGGAATACTTATAAAAGTTAAATTCAGAGAAAATGGACAGCTTCAAGCTCTCAGTGCCCATCGTCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTTACAAACTGCCCATTCAGAGTTGTCGATGAGATTAATCAAGGGATGGACCCAATAAATGAAAGAAAGATGTTCCAGCAACTAGTGAGAGCAGCAAGCAAGCCAAATACACCACAGTGTTTCTTGCTTACCCCGAAGTTGTTACCAGACCTGCAGTATAGTGAGGCATGCAGTATATTGAATGTGATGAATGGCCCATGGATTGAGCAACCTTCAAAGGTCTGGACCGCTGGTGGTCGATGGAGTATTATCACGGGACATGTTGGAGAGACCCTATGTTAA 3159 0.4055 MSESPPPKRFKITRGEDDYMPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGDHKEEHITIMRKINTNNKSEWLFNGNVVPKKDVIETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVDKSRALKHIELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLAKAESMKKKLPWLRYDMQQAEYWEAKERQNDAAKALEEAAKLLNDLKEPIKKQKEEKAALDAKCKKVSSHINENTKKRMELVEKENRLDVELQGKYKDMEELRRREETRQQRLIKAREELAAAELELESLHPYVPPRDEIQRLRAEIVDLDSSANQARQNKSQAENEIKRKKSSMMQCKERLMEMNNKSTKCLHVLQRSGVEKFFEAYKWVQEHRHEFNKEVYGPVLVEVNVSNRVHAAYLEGQVNYYIWKSFITQDSGDRDFLAKHLQFFEVPVINYTGGDGHEREPLEISEEMRTLGIYSRLDQIFDAPVAVKEVLISQFNLEHSYIGSKETDQKANEVPKLGVTDLWTPENHYRWSKSRYGNHVSAVVNQVERPQLLLNNLNVGEIEKLSSQLRELQELVDTLEESVKRFQDEERNLVNQAAKLRKQWESFSITAQNEQKKRQAIVCRIEQRKGILKSMEEQDDVDTEIAKLVDQATKCNIQRFHNAIKIKDLLVDAVGYRRSFVEQRMAVIEFDSKIGEMEANLKQHENSAVQASLHFDNCKKEAENCRQKLIDSLNYAKSIARLTPELEKEFLEMPTTIEELEAAIQDITSQANSILFVNHNILEQYEDRRRQIEDLAAKLEADKKESRKGLAELDNIKGKWLPTLRNLVAQINETFSHNFQEMAIAGEVSLDEHAMDFDQFGILIKVKFRENGQLQALSAHRQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTAGGRWSIITGHVGETLC* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02506 1052 Gene3D - 23 228 IPR027417 -
Rops7g02506 1052 Coils Coil 372 420 - -
Rops7g02506 1052 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1042 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Rops7g02506 1052 Coils Coil 257 288 - -
Rops7g02506 1052 Pfam RecF/RecN/SMC N terminal domain 24 993 IPR003395 -
Rops7g02506 1052 Gene3D - 846 1022 IPR027417 -
Rops7g02506 1052 Coils Coil 194 235 - -
Rops7g02506 1052 Coils Coil 331 358 - -
Rops7g02506 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 995 IPR027417 -
Rops7g02506 1052 FunFam Structural maintenance of chromosomes 5 848 1019 - -
Rops7g02506 1052 Coils Coil 841 875 - -
Rops7g02506 1052 MobiDBLite consensus disorder prediction 386 405 - -
Rops7g02506 1052 Coils Coil 621 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02506 Rops-Chr7 46235422 46279326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02506 8 1041 Structural Maintenance of Chromosomes family AT5G15920 62.379 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02506 K22803 - gmx:100778678 1761.5