Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02495 ATGGGAAAAGCTAGTTGTTGGGTTCTTCTATCCTTTCTCATTGTTACAATCTTTGTGGTTGAAATCCATGGAAGCAAACAAGCTAGAGCACTTGACAAGTTGCAAAAGTCCAAGTTCAAGGCAAGTTCACTAATAGATAGGAGTCTATTTGAGGCACAAGAGCTTGTGCATGATGCAATGGTTCATTCTCAAGATGGTTTGAAAGAGAAAGACAAGATTGAGAAGCTTCCAGGGCAACCCCATGTGAAGTTCTCTCAATATGGAGGGTATGTTACTGTGGATAAATTGGCAGGGCGTGCCTTTTACTATTACTTTGTGGAAGCTCAACGTTCTAAAGAAACAATGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCTTCTCTAGCGTATGGAGCAATGCAAGAACTTGGACCCTTCCGTGTAAACAGTGATGGGAAAACGCTTCACAAAAATAGATATCCATGGAACTATGCTGCAAATGTGTTGTTCCTTGAGTCACCAGCTGGGGTAGGATTTTCATACTCAAACAAATCATCTGATTATGACACCAATGGGGATAGAAAAACAGCTGCAGATAATTATGTGTTCTTAGTGAACTGGTTGGAGAGGTTTCCTGAATATAAGAATAGAGATTTCTACATTGCTGGGGAGAGTTATGCTGGGCATTATGTCCCTCAACTCGCACACAATATTCTCTACCATAACAAAAAGGCTAACCAGACAATCATCAACCTCAAAGGAATAATGATTGGGAATGCAGTTATCAATGATGAAACAGATACAAGAGGAATGTACGATTATCTTGCTAGCCATGCAATCATATCAGACGAAGCAGCACATAATATCAACACATTTTGTGATTTCTCATCAAATTCTTCCATTCAGAATAGTAAGTGCAATGCAGCAGTAGATGAAGTTGGAGAGGATGTTTCTTTCATTGATGTCTACAACATCTATGCTACACTTTGCAATAATCCCAAACCCACTACCATTCCCAAGAAGAACTCAGTTGTTATTGATCCTTGTAGTGATGATTATGTATATGCATATCTTAACCGGGTTGATGTTCAAGAGGCCCTCCATGCCAATGTCACCAAGCTCAAATATGACTGGGAGCCATGCAGTAATATCATTTCAAAATGGGTGGATAGCCCTTCAACAGTTATTCCCCTTTTACATGAATTCCTCAATAATGGACTCAGGATTTGGATCTTTAGTGGTGATATAGATGGAAGGGTGCCAGTTACTTCAACAAAGTATTCCATTAACAAGATGAAGCTTCCCATTAAAACTGCTTGGCATCCTTGGTTCTTATATGGAGAGGTTGGTGGCTATACTCAAGTATATAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGGCATCAAGTGCCAAGCTACCAGCCAGCAAGATCCCTTTCTCTAATCAAACATTTTTTAGATGGCACTCCTCTTCCTAATACTAAAAGATATGGCTAA 1488 0.4019 MGKASCWVLLSFLIVTIFVVEIHGSKQARALDKLQKSKFKASSLIDRSLFEAQELVHDAMVHSQDGLKEKDKIEKLPGQPHVKFSQYGGYVTVDKLAGRAFYYYFVEAQRSKETMPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHKNRYPWNYAANVLFLESPAGVGFSYSNKSSDYDTNGDRKTAADNYVFLVNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYHNKKANQTIINLKGIMIGNAVINDETDTRGMYDYLASHAIISDEAAHNINTFCDFSSNSSIQNSKCNAAVDEVGEDVSFIDVYNIYATLCNNPKPTTIPKKNSVVIDPCSDDYVYAYLNRVDVQEALHANVTKLKYDWEPCSNIISKWVDSPSTVIPLLHEFLNNGLRIWIFSGDIDGRVPVTSTKYSINKMKLPIKTAWHPWFLYGEVGGYTQVYKGGLTFATVREAGHQVPSYQPARSLSLIKHFLDGTPLPNTKRYG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02495 495 Gene3D - 390 485 - -
Rops7g02495 495 Gene3D alpha/beta hydrolase 67 327 IPR029058 -
Rops7g02495 495 Gene3D - 344 380 - -
Rops7g02495 495 Pfam Serine carboxypeptidase 78 485 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Rops7g02495 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 71 472 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 SUPERFAMILY alpha/beta-Hydrolases 75 489 IPR029058 -
Rops7g02495 495 FunFam Carboxypeptidase 67 327 - -
Rops7g02495 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Rops7g02495 495 FunFam Carboxypeptidase 390 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02495 Rops-Chr7 45865166 45871768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02495 352 488 Calmodulin-binding Proteins AT2G22960 32.117 2.57e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02495 K16297 - gmx:100783864 791.186