Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02487 ATGGCCCAAAAGGGAGGTCTGATCTCCCGGAATGATAAATTTGTTTCTAACATTGAAAAGGAGCCTCCTCTCGCCAATGCAAACACCATTCTCTCTTTCCTCGCAGTTGATTATCTGATGGAAAAGGTGACGATGGATAACATGAGCGGTTTGAGCAGTAGATGGGAGGGTCTAATGGTTGGATCTACAGAGGAGGGATGTCATGAGATTTCATTGGAGAATGAAAACGAAGATGTTGAATATGGTGGGGATGAATATGGTGAATATGTTGGTGATAATGAGGAATTTGAAGAACAACATGTGGAAGGTGTAATGTACAACAGTGGTGATGAAGAGGATATTGTTGATAGTTATGAAGATGATATAGAAAATGTGGAGGTTGTTCGGAGTAGTGTGGAAGGTAAGTTCATAAATATTAATGGTATTGATGACATTGGGAATATTGACTTAGTGAACTTTGGTCCGCATGAAGTATCTAATGTTGATTTCAGTAGTATTGAGGTGGCTCTTCTGTTCTACACTTTATATGCAAGAGTGAAAGGATTTGTGGTTAGAAAGTCCAAGATTGTTAGGAATAAGACAGGTGATGTTGTTCAACAAACATTTGTTTGTAATAGAGAGGGATATAGGGAGGATAGAGGATTGACCATTGAAGAAAGAGAGAGAAAGCAGAAAGTGCAGACAAGATGTGGTTGTAAAGCCCAATTAAGGGTGCATGTTGATAATCAATCGATGAGGTGGTTTGTAACTTATTTTGATGATGACCATAATCATGATTTGGTGGTTGCTAAGTATGTGGGTATGTTACCTGGGTACAGGAAGATGACAGAGTTGGATGTTATGGAGATGAATTATTTTAAGAATGCTGGAATACCCCCATATTTAATGTATGGTTCTTTTGCTTGCCAATCTGGGGGGTATGAAAACATTGGTTTTAATTAG 942 0.3854 MAQKGGLISRNDKFVSNIEKEPPLANANTILSFLAVDYLMEKVTMDNMSGLSSRWEGLMVGSTEEGCHEISLENENEDVEYGGDEYGEYVGDNEEFEEQHVEGVMYNSGDEEDIVDSYEDDIENVEVVRSSVEGKFININGIDDIGNIDLVNFGPHEVSNVDFSSIEVALLFYTLYARVKGFVVRKSKIVRNKTGDVVQQTFVCNREGYREDRGLTIEERERKQKVQTRCGCKAQLRVHVDNQSMRWFVTYFDDDHNHDLVVAKYVGMLPGYRKMTELDVMEMNYFKNAGIPPYLMYGSFACQSGGYENIGFN* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02487 313 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 68 309 - -
Rops7g02487 313 Pfam FAR1 DNA-binding domain 172 261 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02487 Rops-Chr7 45778946 45783142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02487 12 44 Glycosyltransferase AT4G38190 68.571 6.35e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g02487 FAR1 7.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02487 - - tpra:123913749 199.519