Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02469 ATGGCCAAGAAGGGCTGGTTTAGCATGCTAAAGAGGCTCTTTATATGGGACACAAATTCCACACAAGAGAAGAAGGAGAGAAGAAGAAAGTGGGTATTTGGGAGGCTAAAGACCAAGAGATTTCCTTCAATTGAAGCCCCACCACCATCAAAAGAAACAAGACTGAGTGAAGCTGAGGAAGAACAAAGCAAGCATGCTTTAAAAGTGGCCATTGCCTCAGCTGCTGCTGCTGAAGCTGCTATCACTGCTGCTCAGGTTGCAGTCCAGGTTGTTAGGCTCCAATCTGCTCATCAAGGTAGAGAAAAACCAGAAGAGTTTCAACCTGTTAAAACTAGATATCATTCTCCTCAATCCACACACCAATGCCAGAGGAAGATTGAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTAGCAAGGAAAGCTTTGAAGGCATTGAAAGGAATAGTGAAACTTCAAGCTATCATTCGTGGCAGAGCTGTAAGACGCCAAGCTATGAGTACTCTCAAGTGTTTGCAGTCCATTGTAAATATCCAATCACAAGTCTATGCAAGGAAACTCCAAATGGTTGAAGGAAGATGGGATTGTGGTGAAAATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAATGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATTTTAATGAAGAAAGAGGTAGATGCCTCTTGCATAAGCAAGAAAGAAGCTGCTCTTAAGAGAGAGAGAATAAAAGAGTACTCATATAACCATAGAAGGTCTGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGGTACTGGATGGAGCAATGGGTAGACACTCAACTTTCGAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCACACATTCTAGACCTGGGGAGGAATGTGGAAGAAGACATCTTAAGATTAGACATATTCAGAGACAAAATCAAGTTGAAGGGTTAGATTCTCCAAGACTTGCTTCAAGGAACTCTTTTCCCCTCAGGAGCCATAATTCAGAGGGAGAAGATCACTCTTTCCCAAGCTCTCCTGCAATTCCTACATACATGGCAGCAACAAAATCAACACAAGCAAGAGTAAGATCAACAAGCACTCCAAAGGCTAGAACAGGAGGGAATTTGGACATGAACTTTGATAACTATTCACCATGCAAGAAAAAGCTATCTATTGTAGCTTCTATTAACAGTGAAGTGCTCAGTAATTGTAGGATGGGCAAGCTTAATAGTAATCAGCAAAGATCTCCTAGCTTAAAGGGTCTTTCAAGGCCTTTAAAATCAAGCCAGACAATGAAGGATTTCAGCATCAATTCAGACTGTTCAGTGCCCAATTGA 1368 0.4101 MAKKGWFSMLKRLFIWDTNSTQEKKERRRKWVFGRLKTKRFPSIEAPPPSKETRLSEAEEEQSKHALKVAIASAAAAEAAITAAQVAVQVVRLQSAHQGREKPEEFQPVKTRYHSPQSTHQCQRKIEESSAIKIQTAFRGYLARKALKALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVNIQSQVYARKLQMVEGRWDCGENEEMQGSRDKIIMMDSNSERRWDDSILMKKEVDASCISKKEAALKRERIKEYSYNHRRSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSTHSRPGEECGRRHLKIRHIQRQNQVEGLDSPRLASRNSFPLRSHNSEGEDHSFPSSPAIPTYMAATKSTQARVRSTSTPKARTGGNLDMNFDNYSPCKKKLSIVASINSEVLSNCRMGKLNSNQQRSPSLKGLSRPLKSSQTMKDFSINSDCSVPN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02469 455 SMART iq_5 126 148 IPR000048 GO:0005515
Rops7g02469 455 MobiDBLite consensus disorder prediction 358 386 - -
Rops7g02469 455 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Rops7g02469 455 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Rops7g02469 455 MobiDBLite consensus disorder prediction 99 119 - -
Rops7g02469 455 Pfam Protein of unknown function (DUF4005) 345 429 IPR025064 -
Rops7g02469 455 FunFam IQ-domain 11 126 177 - -
Rops7g02469 455 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Rops7g02469 455 Gene3D - 125 177 - -
Rops7g02469 455 MobiDBLite consensus disorder prediction 322 341 - -
Rops7g02469 455 MobiDBLite consensus disorder prediction 321 386 - -
Rops7g02469 455 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Rops7g02469 455 MobiDBLite consensus disorder prediction 417 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02469 Rops-Chr7 45248688 45251751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02469 3 455 IQD Protein Family AT5G13460 44.540 5.00e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02469 - - gmx:100777067 679.093