Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02466 ATGGATGTGGGAGAATTTATTGTGCCAATTCCACAGGTTAAACAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGATTTGGCTGCCAAGTCTTGTCGGGGTCTCCCTGTAGAGCTTGCTGCAAAACCAGTGGTTAAGGGAGCTCTAAGATCAAGAGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCTGACCTTTCTATATTACCCCTCTCCTCAGATGCACGGCTAGATAACTCGTCCCAACGTGCATGCATGTCTCGTTTGAGTGCTCGAGGACATCCATGA 339 0.4543 MDVGEFIVPIPQVKQVKLSNAGGRLIIASDGIWDALSSDLAAKSCRGLPVELAAKPVVKGALRSRGLKDDTTCLVVDIIPSDLSILPLSSDARLDNSSQRACMSRLSARGHP* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02466 112 SUPERFAMILY PP2C-like 5 78 IPR036457 -
Rops7g02466 112 Gene3D - 2 82 IPR036457 -
Rops7g02466 112 PANTHER PROTEIN PHOSPHATASE 7 77 IPR015655 GO:0004722|GO:0006470
Rops7g02466 112 Pfam Protein phosphatase 2C 6 46 IPR001932 -
Rops7g02466 112 ProSiteProfiles PPM-type phosphatase domain profile. 1 78 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02466 Rops-Chr7 45035197 45035535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02466 1 105 PP2C-type Phosphatase Gene Family AT1G68410 67.619 6.32e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02466 - - gmx:100807886 147.517