Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02450 ATGATCACTTCCTCTCGGTTTCTCTTCCTTTCACTCCTTGCATTTTGCTTCACATCACTTGCTTCAGGAGTCGCTTCTCAGCTGCCACAGGATGAAGTGCAAGCTCTGACAGATATAGCCAAAACACTTGGTAAGAAAGATTGGAACTTCAGTACAAATCCATGCAGTGGACACCCTAATTGGATTACATATAATTCATCAAGTGGACAAGCAAATAATGTTTCCTGTAATTGCTCTGTCCCCAATGACAACTTCTGCCATGTTATTACCATAGCCCTCAAAGCACAAAATCTTCAAGGCAGGCTCCCACCAGAACTGATCAGGCTGCCATATCTTCAAGAAATTGACCTTACCCTCAATTACCTTAATGGTACAATTCCTAAAGAATGGGGCTCCATGAAGAATCTTTTTAACATTACTCTTTTTGGAAACCGACTAACTGGTCCAATCCCAACAGAGCTGGCAGACCTCAACAATCTCAAATTTTTGATCCTCGAGTTCAATCAATTCTCTGGAAATCTTCCTCCACAACTTGGGAATCTTGTCCACATTGAAAAACTGCATCTAAGCTCCAACAACTTTACTGGAAAATTGCCTGAAACACTAGCAAGGCTTACTACAATCAAGGAATTCCGAATCAGTGACAATCAATTCTCTGGAAGCATACCCGATTTTATTCAAAGATGGATAAATCTTGAACAATTAGCAATTCAAGGGAGTGGTTTAAGTGGACCAATTCCTTCTGGAATTTCATTTCTGCATGGCTTAATCGACTTGAGGATTAGTGACTTGAATGGCCCTGATTCTACTTTTCCACGACCACGAATTGATAATATGACTGAACTGAAAACATTGATACTAAGGAGTTGCAATATTAACGACACACTTCCACAATATCTTGCAAACTTAACAAATTTGCAACTCTTAGACCTCAGCTTTAACAAAATAAGTGGAGGCATTCCAAGAAACCTTGAGAGTTTTATAGGAGCTACCTACATATATTTAACAGGAAACTTTCTCACTGGACAAGTGCCCGAGTGGACAAAGAAGCCTCAGAAATACTTAGATCTTTCATATAACAACTTCAGTGTCCCAGAGCCAGATTCATGTTCTGAGCCAAATGAGAACTTGTTTGCCAGCTTTTCAAGGAATAACTCAGGACCAGTTTCTTGTGATAGGAACACTACAATATGTACCAAAACCATTAAATCTCTACATATAAATTGTGGTGGAAAACAGACTATCATTGGAGGTATAACATATGATAAAGATATAGATCCAGCAGGACCAGCAGTGTATAGACAGAGTGGTGACAACTGGGCATTTAGCAATACTGGTCACTTCTTGGATAATAATACCATAAATATACGGCTCCCATATACCACAGAGAATGAAACTAGGCTTTATATGACTGATATTGAATTATATAAGAATGCACGTATTTCCCCCTTGTCTTTGACTTATTATGGATTTTGCTTGGAAAATGGAGACTACACAGTAAAGCTCCACTTTGCTGAGATAATGTTTACTGATGATGACACATATGGCAGCCTAGGTAGACGTCTATTTGATGTCTACATTCAGGGAAAGTGTGTACTGAAGGATTTCAATATTGCAAATGAAGCACAAGGAGTTGGCAAGGAAAGTATAAAACAATTTCCTGCTCACGTGAGTAGTAATGATTTAGAGATCCGCTTCTATTGGGCTGGCAGAGGGACAACATATATCCCATATAAATCAGTAAATGGTCCTCTTATATCAGCTATATCTGTCACATATGACTCTGCACGTGGCATCTCTGTTGGGGCAATTGTTGCAATTGTGGCTGCAGCAGTGATTTTTGTCATTTTGATTGTTGTTGGCATACTTTGGAGGGGAGGCTGTCTAGGAAAAAAACATTTATTAGTAAGAGAGCTAAAGGGTGTAGACCTGCAAACGGGTTTATTTACCTTAAGACAAATCAAAGCAGCAACAAACAACTTTGATATTGCAAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGATGTTTGTCAGATGGAACATTAATTGCAGTCAAGCAGCTTTCTTCTAAATCAAGGCAAGGGAATCGTGAGTTTTTAAATGAAATAGGCATGATTTCTGCTTTGCAGCACCCAAATCTTGTTAAACTCAAAGGATGTTGTGTGGATGGAGATCAACTATTGTTGATATATGAATATATGGAAAACAACAGCCTTGCTCGTGCTTTATTTGGCCCCGAAGAAAACCAAATAAAATTGGATTGGTCAACAAGACAAATGATTTGTGTTGGTATTGCTAGAGGTTTAGCATACCTCCATGAAGAATCAAGACTGAAGATTGTTCATAGGGACATCAAGGCCGCTAATGTGTTGCTTGATAAAGATCTCAACCCAAAGATATCGGACTTTGGTTTGGCCAAGCTTAATGAAGAGGACAACACCCATATCAGTACCCGAATAGCTGGGACTTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACCGACAAAGCCGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTATTAGTGGAATGAGCAACACCATTCACCGGCCAAAGGGTGATGCTTTATATATTCTTAATAGGGCACATCTGTTAAAAGAGAAAGGAAATCTGATGGAGCTAGTTGATCTAAGGTTGGGTTCTGATTTCAATGAAGAGGAGGCAATGGTGATGGTCAACGTGGCTCTCCTATGCACCAATGTCACTTCAAACCTTAGACCCTCCATGTCATCAGTGGTAAGCATGCTTGAAGGTAGAACTGTGGTTCCAAAATTTGTTTCAGATCCAAGTGAAGAAATGGATGAGATTAAGATGGAGGAAATGCAACAGTATTATCATCAAATAGATGAAAATAAGATAAGTGAGACACAAACTCAAAGTCAGAGTTTATTAATTGATGGGAAATGGACTGCTTCATCTTCATCAGCTGTAGACCTGTATCCCATCAACCTTGATTCTTCCTCCTATTGGGAGAAAAGAAATTAA 3033 0.3907 MITSSRFLFLSLLAFCFTSLASGVASQLPQDEVQALTDIAKTLGKKDWNFSTNPCSGHPNWITYNSSSGQANNVSCNCSVPNDNFCHVITIALKAQNLQGRLPPELIRLPYLQEIDLTLNYLNGTIPKEWGSMKNLFNITLFGNRLTGPIPTELADLNNLKFLILEFNQFSGNLPPQLGNLVHIEKLHLSSNNFTGKLPETLARLTTIKEFRISDNQFSGSIPDFIQRWINLEQLAIQGSGLSGPIPSGISFLHGLIDLRISDLNGPDSTFPRPRIDNMTELKTLILRSCNINDTLPQYLANLTNLQLLDLSFNKISGGIPRNLESFIGATYIYLTGNFLTGQVPEWTKKPQKYLDLSYNNFSVPEPDSCSEPNENLFASFSRNNSGPVSCDRNTTICTKTIKSLHINCGGKQTIIGGITYDKDIDPAGPAVYRQSGDNWAFSNTGHFLDNNTINIRLPYTTENETRLYMTDIELYKNARISPLSLTYYGFCLENGDYTVKLHFAEIMFTDDDTYGSLGRRLFDVYIQGKCVLKDFNIANEAQGVGKESIKQFPAHVSSNDLEIRFYWAGRGTTYIPYKSVNGPLISAISVTYDSARGISVGAIVAIVAAAVIFVILIVVGILWRGGCLGKKHLLVRELKGVDLQTGLFTLRQIKAATNNFDIANKIGEGGFGPVYKGCLSDGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPNLVKLKGCCVDGDQLLLIYEYMENNSLARALFGPEENQIKLDWSTRQMICVGIARGLAYLHEESRLKIVHRDIKAANVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGMSNTIHRPKGDALYILNRAHLLKEKGNLMELVDLRLGSDFNEEEAMVMVNVALLCTNVTSNLRPSMSSVVSMLEGRTVVPKFVSDPSEEMDEIKMEEMQQYYHQIDENKISETQTQSQSLLIDGKWTASSSSAVDLYPINLDSSSYWEKRN* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02450 1010 SUPERFAMILY L domain-like 83 362 - -
Rops7g02450 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Rops7g02450 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 737 944 - -
Rops7g02450 1010 SMART serkin_6 661 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02450 1010 ProSiteProfiles Protein kinase domain profile. 661 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02450 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 630 736 - -
Rops7g02450 1010 Pfam Malectin domain 404 589 IPR021720 -
Rops7g02450 1010 FunFam Leucine-rich repeat transmembrane protein kinase 201 404 - -
Rops7g02450 1010 SUPERFAMILY Protein kinase-like (PK-like) 644 946 IPR011009 -
Rops7g02450 1010 Gene3D - 404 595 - -
Rops7g02450 1010 Gene3D Ribonuclease Inhibitor 267 403 IPR032675 -
Rops7g02450 1010 Gene3D Phosphorylase Kinase; domain 1 631 736 - -
Rops7g02450 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 970 - -
Rops7g02450 1010 Gene3D Transferase(Phosphotransferase) domain 1 737 944 - -
Rops7g02450 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 594 - -
Rops7g02450 1010 CDD STKc_IRAK 667 934 - -
Rops7g02450 1010 Gene3D Ribonuclease Inhibitor 29 266 IPR032675 -
Rops7g02450 1010 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 198 - -
Rops7g02450 1010 Pfam Protein kinase domain 663 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02450 Rops-Chr7 44676118 44688207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02450 25 966 Receptor kinase-like Gene Family AT1G53420 54.517 0.0 994
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02450 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02450 - - gmx:100791136 1358.2