Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02444 ATGTTGGGCTTGGAAAGGAGCTCCAGACAACTAACAAAGGTGATCTTGATGCTGAAAAAGTTTCAAGAAGTCTCAATGGCATATGAGGTTTTGAAGGATGAAGAAAAGAGTACGTTATGTAAGGGTGTTGCACCCTGTCACAGCCATGGCGTACTCCACCGTGATCTGGAGCCCCAGAACTTTCTTCTAGACCAGAAGAAGGGTATTCTCACAGTCGGCGACCTCGGACTCGGTCGCGCCTTCACTATCCCTCTTAAAAGCTACACTCACGAGATTGTTACCCGTTGGTATAGAGCTCCTGAGGTTCTTCTCGGATCCACCCATTACTCTACTGGGGTTGACATGTGGTCTGTTGGATGCATCTTTGCGGAAAAGGTGAGGAGGCAAGCTTTGTTTCCTGGGGATTATGAGTTCCAGCAGTTACTTAACGTTTTCAAGCTTTTGGGGACTCCAACGGAGGAGCAATGA 468 0.4786 MLGLERSSRQLTKVILMLKKFQEVSMAYEVLKDEEKSTLCKGVAPCHSHGVLHRDLEPQNFLLDQKKGILTVGDLGLGRAFTIPLKSYTHEIVTRWYRAPEVLLGSTHYSTGVDMWSVGCIFAEKVRRQALFPGDYEFQQLLNVFKLLGTPTEEQ* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02444 155 SMART serkin_6 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02444 155 Gene3D Transferase(Phosphotransferase) domain 1 38 154 - -
Rops7g02444 155 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02444 155 SUPERFAMILY Protein kinase-like (PK-like) 38 154 IPR011009 -
Rops7g02444 155 PANTHER CELL DIVISION PROTEIN KINASE 38 155 - -
Rops7g02444 155 Pfam Protein kinase domain 37 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02444 Rops-Chr7 44416176 44416774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02444 39 155 Core Cell Cycle Gene Families AT3G54180 83.761 7.17e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Rops7g02444 Pkinase 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02444 K07760 - pop:18100040 218.394