Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02436 ATGTCCGAGTACCATATGGATTCCACGGGTTTGAGTATAGATAGCTTGTCTGATGCTGGGTTCCTAGGGGCTCTTGCCCTTGGTAATACTACGTGTAGAATGGCAGTAGCTAGAATAACTTCAAAAGACATAGTTTGCTGGTTTCGATCACACATTACTGCAGAAATCCAATGGGGTGGTGCAAAGCATGAACCTGGTGGAAAGGATGATGGTAGGAAGATGCACCCAAGGTCATCATTCAAGGTTTTCCTTGAAGTTGTGAAGGCAAGGAGCTTACCACTTCACGACACACCAGGGAAGGTTCAAAGCTTCAAGCAAGCTTCAGTTCATGTAGAGAATAGAAGAAAAGCCATGGTGGTTGGGCAAGCTCTTCCTTCTACTTTATTGGCTCCCTCTCCAGTTTACAACAACTTCTCTTTCACTGAGTTGACTCGTTGA 438 0.4498 MSEYHMDSTGLSIDSLSDAGFLGALALGNTTCRMAVARITSKDIVCWFRSHITAEIQWGGAKHEPGGKDDGRKMHPRSSFKVFLEVVKARSLPLHDTPGKVQSFKQASVHVENRRKAMVVGQALPSTLLAPSPVYNNFSFTELTR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02436 145 Gene3D - 7 95 IPR043150 -
Rops7g02436 145 PRINTS Phytochrome signature 43 62 IPR001294 GO:0006355|GO:0009584
Rops7g02436 145 PRINTS Phytochrome signature 76 94 IPR001294 GO:0006355|GO:0009584
Rops7g02436 145 PANTHER OS08G0260000 PROTEIN 33 95 - -
Rops7g02436 145 SUPERFAMILY GAF domain-like 5 93 - -
Rops7g02436 145 Gene3D - 53 89 IPR029016 -
Rops7g02436 145 Pfam Phytochrome region 5 95 IPR013515 GO:0006355|GO:0009584
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02436 Rops-Chr7 44273366 44274096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02436 5 93 Histidine Kinase Gene Family AT2G18790 67.416 7.04e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02436 K12120 - mof:131153017 156.762