Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02429 ATGGACTCAGGTTCACCATACCAATGGCTAAGGGAGCTGAGATGGGACTCCCAGGGCTTAAATCCCATAAGCCTTCTCATTGACTGTGCTAAACTAGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGACTTGAGTATATCTCTCAGATTTCATCTCCTGATGGTAATGCAGTGCAAAGGATGGTCACTTATTTCAGTGAAGCACTTGGTTACAGGATAGTCAAACATTTGCCTGGTGTATATAAAGCTCTCAATTCCTCCAAAACATCATTGTCTTCAGAAGACATCCTTGTTCAGAAACACTTCTATGAATTGTGTCCATTTTTGAAGTTTTCATACCTGATCACAAATCAAGCCATTGTAGAAGCAATGGAATCTGAAAAGGTGGTTCACATTATTGATCTCCATTGTTCTGAGCCAGCTCAATGGATAAATCTTCTAATAACTTTAAAGAACCGTCCGGGGGGTCCACCTCATCTGAAAATTACAGGCATTCATGAAAAGAAGGAGGTTTTAGACCAAATGAGCTTTCATTTGACAACTGAAGCTGGGAATTTGGATTTTCCTTTACAGTTCAATCCAATTGTTAGCAAAGTGGAAGATGTTGATTTTGAAAACTTGCCTGTTAAGACAGGAGAAGCTCTTGCAATTACTTCTGTTCTTCAGCTGCATTCTCTTCTTGCCACTGATGATGAAATGGTTGGGAAGATCTCACCAGCAGCAGCAGCATCTATGAATCTGCAGAGAGCAGTGCATTTAGGCCAAAGGACTTTTGCAGAGTGGCTTGAAAGAGACATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTATCACCTCTTTCTTTAGGTGCTTCACCAAAGATGGGGATCTTTCTTAATGCTATGCGAAAACTCCAACCGAAACTGATGGTGATTACTGAACAAGAATCAAACCTAAATGGATCTAATTTAATGGAAAGAATTGACAGAGCATTGTACTTTTACAGTGCATTGTTTGACTGCTTGGACTCTACTGTTATGAGAACATCAGTAGAGAGACAAAAACTTGAGAGCATGCTTCTTGGGGAGCAGATAAAGAACATTATTGCTTGTGAGGGAGTTGATAGAAAGGAGAGGCATGAGAAACTTGAGAAATGGATTAGAAGACTTGAAATGGCTGGCTTTGTGAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCAAAGAATCTGTTGCAAAGATATGGTCATAAATACAAGTTTAGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGTGATATACCACTATTTTCTGTATCAGCCTGGAGTTTTAGGAGATGA 1329 0.398 MDSGSPYQWLRELRWDSQGLNPISLLIDCAKLVASGSIKNADIGLEYISQISSPDGNAVQRMVTYFSEALGYRIVKHLPGVYKALNSSKTSLSSEDILVQKHFYELCPFLKFSYLITNQAIVEAMESEKVVHIIDLHCSEPAQWINLLITLKNRPGGPPHLKITGIHEKKEVLDQMSFHLTTEAGNLDFPLQFNPIVSKVEDVDFENLPVKTGEALAITSVLQLHSLLATDDEMVGKISPAAAASMNLQRAVHLGQRTFAEWLERDMINAYILSPDSALSPLSLGASPKMGIFLNAMRKLQPKLMVITEQESNLNGSNLMERIDRALYFYSALFDCLDSTVMRTSVERQKLESMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYGHKYKFREENDCLLVCWSDIPLFSVSAWSFRR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02429 442 ProSiteProfiles GRAS family profile. 13 439 IPR005202 -
Rops7g02429 442 Pfam GRAS domain family 23 438 IPR005202 -
Rops7g02429 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 435 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02429 Rops-Chr7 44075298 44077431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02429 1 442 GRAS Transcription Factor Family AT1G50420 51.333 2.86e-158 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g02429 GRAS 1.3e-118 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02429 - - gmx:100779726 798.89