Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02428 ATGAATGGTGAAGATAGGGGCAAATACCTTGCCCATATTCTTCATGCCTGTGCTAAGTATATTGAGTCAGGCAGCATCATGAATGCAGATAATGCGCTGGAATATATTGCTCACACTGCCTCCCCTGATGGTGATGCAATGCAGCGGGTAGCTACCTATGTCAGTGAGGGGCTAGCTTTCCAAGTGCTGAAAAATTTGCAAGGTGTACCTAAAGCTCTAAGTTTGCCAAAAACATTGTCAACCTCAGAAGAACTACTTGTTAAGAATTCATTCTTTCAGTTGTATCCATTTCTAAAGATTGCATATGTGATCACCAGTCATGCAATTGTTGAAGTCATGGAGGAGGAAGAAGTGATCCATATCATTGATCTCGGTGCATCTGAGGCTGCTCAGTGGATTTATCTTATGCAGAGATTGAAAGAATGTCAAATGAAGCCACCATTGCTGAAAATTACAGGCATTCATGAGAAGCAGGAAGTTTTAGAGCAAATGGACCTTCACTTGAAAGTAGAAGCTAAAAAGTTTAATTTCCATATCAAATTCAATGCTATTGTAAGCACTTTGGCGAATCTTGACCTTGAAAGATTGCCTGTGAAGAAGGGAGAGCTTCTTGCAATCAGCTCAGTACTTCAGCTGCACTCTCTTCTTGCCACTGATGATCCAATGGTTTGCAACAGGAACCCCCCAGCAGAATCAATGAATCATAGGACATTTAGGGAGGTGCTTGGGAAACAAAAGATGAACCCGGGTCCTGATTCATCATTGTTATCACTTCCTCTTTGTGATTCTTCATCCAAGATGGGGTGCTTTCTAAATGGTCTAAGGAAACTCCAACCTAGAGTGGTAGTGATTACTGAACAAGAATCCAATGTTAATGGTTCTTCTTTGACAGAAAGGGTTGACAAAGCATTGGAATTTTATGGTGCATTGTTCAATTGCTTGGAATCAACTGTTTCAGAAACAAAAGTAGAGAGAATCATACTTGAAAGGACTTTATTAGGGGAGGAAATAAAGAACATTGTTGCATGTGAGGGAGTTGAGAGAAAGGAGAGGCATGAGAAACTTGAGAATTGGATTCCAAGGCTTGAATTGGCTGGTTTTGGGAGGGTACCTATTAGCTATGATTGGATGATGCAGGCAAAAAAGGAGTTGCACGGCTATGGAAATGGATATAAGCTTCTTCAAGAGAATAAATGTTTGTTTGTCTGCTGGAATGATAAGCCACTCTTTTCTGTATCAGCATGGAAGGTATAA 1254 0.4059 MNGEDRGKYLAHILHACAKYIESGSIMNADNALEYIAHTASPDGDAMQRVATYVSEGLAFQVLKNLQGVPKALSLPKTLSTSEELLVKNSFFQLYPFLKIAYVITSHAIVEVMEEEEVIHIIDLGASEAAQWIYLMQRLKECQMKPPLLKITGIHEKQEVLEQMDLHLKVEAKKFNFHIKFNAIVSTLANLDLERLPVKKGELLAISSVLQLHSLLATDDPMVCNRNPPAESMNHRTFREVLGKQKMNPGPDSSLLSLPLCDSSSKMGCFLNGLRKLQPRVVVITEQESNVNGSSLTERVDKALEFYGALFNCLESTVSETKVERIILERTLLGEEIKNIVACEGVERKERHEKLENWIPRLELAGFGRVPISYDWMMQAKKELHGYGNGYKLLQENKCLFVCWNDKPLFSVSAWKV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02428 417 ProSiteProfiles GRAS family profile. 1 416 IPR005202 -
Rops7g02428 417 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 412 IPR005202 -
Rops7g02428 417 Pfam GRAS domain family 11 416 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02428 Rops-Chr7 44062914 44064167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02428 4 416 GRAS Transcription Factor Family AT1G50420 46.759 3.63e-132 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops7g02428 GRAS 2.2e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02428 - - gmx:106798410 446.047