Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02399 ATGTTTCTTGTTGGCTTGGCAGGGCTAGTTGCAGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTATCTGTGTACACTCAGTTGGACATAATGGGAGCTCAAATGAAAAGAGAAAGGGGAGTCAACAATGGCAAAGAGAGAGAAGGGGATGAAGATGACAAGCTGCCAAACCCTTACCAGGATACCATAACATCAGCAATTGCATTTTATTTTGGTGTCGCTTTGCCATCGCTAGCAATAGATATATAA 249 0.4337 MFLVGLAGLVAGACSMAIGEFVSVYTQLDIMGAQMKRERGVNNGKEREGDEDDKLPNPYQDTITSAIAFYFGVALPSLAIDI* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02399 82 MobiDBLite consensus disorder prediction 39 57 - -
Rops7g02399 82 MobiDBLite consensus disorder prediction 38 57 - -
Rops7g02399 82 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 79 IPR008217 GO:0005384|GO:0030026
Rops7g02399 82 Pfam VIT family 1 46 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02399 Rops-Chr7 43303396 43303644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02399 1 79 Nodulin-like Gene Family AT3G43660 59.494 8.08e-24 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02399 K22736 - vvi:100257248 103.605