Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02394 ATGGCTTCCAATTGTGAACAAAATCAGCTTCCAAATAGATCACCCCATCATGAAGAAGATGAAAATAACGCATGCCTCTCTGCCATGCTACTTTGCAGTGGTCCAGTTATCTATTCAGCAGCACTGAATGCTGCCCTTGAGCTCAACTTGTTTGAGATAATAGCTAAGCCAACCCCACATGGTGTTTCAGCATCCTATGTTGCTTCTCAACTTCCAAAACAGCACCCAGAATTGCCTAGAAGGCTTGACCGTATGCTGAGTCTACTAGCAAGTCACTCTCTTCTCACTTGTTCCACCCAAGCAAATGAAGATGGTGGCATTGAAAGAATTTACCAGCTTTCACTCGCTGGTAAATACTTGGTCAATGATGAGAAAAAGGGCTCTGTAGCTTTGTTCCCAACGCTTCTGAGCCACCGGGCAATCGTGGATGCTTTCCTCAATTTTAAGGAGGTACTTTTGGACTGTGATACTGGACTTTTCCAAAAAGTTCATGGAATGCCCATTTATCAAGGCATACAGTCAGATCCGGCATTGAATAATGTTTTCAACAAAGCTATGGCCAATATGTGCACAGTCGAGATGAACAAGATACTTGAGATATACAATGGATTTGAAGAAATATCATTGCTGGTTGATGTGGGTGGTGGCGTTGGCCAAAATTTGAATATGATAATCTCCAAGTATCCTTCCATGAAGGGTATTAATTTTGATCTGCCCCAAGTAATACAAAATGCTCCAGATTATCCAGGGATAAAGCATGTTGGAGGAGACATGTTTGAAAAAGTTCCAAAAGGTGATGCCATAATACTGAAGGCTGTATTGCACAATTGGTCTGATGAAAATTGTTTAAAAGCTTTACGTAATTGTTACAAAGCTTTACCACAAAATGGGAAGGTGATTGTTGTGGACTTCATAATGCCTGAAACAATTCAGTCTACAGAAGCAGGTAAGGTGATTACTGGCTTTGACAACATCATGTTTCTGGCTGGTGGCAGTGAAAGAACAGAGAAAGAATTTGAGAGTTTGTGCAATCGTTCTGGGTTTTCAAAGTTTCAACTTGTTTGCCGTGCTTTTTCTGCTCTGGGAGCGATGGAATTTTATAAATGA 1107 0.4092 MASNCEQNQLPNRSPHHEEDENNACLSAMLLCSGPVIYSAALNAALELNLFEIIAKPTPHGVSASYVASQLPKQHPELPRRLDRMLSLLASHSLLTCSTQANEDGGIERIYQLSLAGKYLVNDEKKGSVALFPTLLSHRAIVDAFLNFKEVLLDCDTGLFQKVHGMPIYQGIQSDPALNNVFNKAMANMCTVEMNKILEIYNGFEEISLLVDVGGGVGQNLNMIISKYPSMKGINFDLPQVIQNAPDYPGIKHVGGDMFEKVPKGDAIILKAVLHNWSDENCLKALRNCYKALPQNGKVIVVDFIMPETIQSTEAGKVITGFDNIMFLAGGSERTEKEFESLCNRSGFSKFQLVCRAFSALGAMEFYK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02394 368 Pfam Dimerisation domain 41 90 IPR012967 GO:0046983
Rops7g02394 368 Pfam O-methyltransferase domain 158 349 IPR001077 GO:0008171
Rops7g02394 368 Gene3D - 37 197 IPR036388 -
Rops7g02394 368 PANTHER O-METHYLTRANSFERASE 37 358 IPR016461 GO:0008168
Rops7g02394 368 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
Rops7g02394 368 PIRSF O-mtase 6 368 IPR016461 GO:0008168
Rops7g02394 368 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Rops7g02394 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 356 IPR029063 -
Rops7g02394 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 368 IPR016461 GO:0008168
Rops7g02394 368 Gene3D Vaccinia Virus protein VP39 179 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02394 Rops-Chr7 43118610 43121104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02394 21 358 Monolignol Biosynthesis Gene Families AT5G54160 48.235 2.90e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02394 - - gmx:100784030 543.502