Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02392 ATGGTTGCTTTGCTTATAGCTTTTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGACCCAATGGGTAAAATGGCTGCAACAATTACAGCCAGCCATGGGCGTAAGGAGCTGGTAGGGTATCTTGCAGAGGTAACAACTGCAAGATTTTTGGTAGTAGCTGTGCGGCATTCTTGCATGCTATTCAAACAGAAAAAGCATGTCAATCCTTTGTACTCTTCATCCACAACTTGGTCATTATGCTATCAACAGTGGTGTCTGGAGGGGGTTACATTCATGAAGCTATGGTCCAGGTTGGCATCAAGCGTATGGTCTCACAAGTTGTTCACATTGAGGACAAGTAAGAGGGCGATCAAAAGAGCCAGATGCAGGCTCAGGCTACTCAAGAACAAGAAGCAGGCAATAGTGAAGCAATACAAAGTGGCCATGGGAGAATTGGAGGTTGAGCAGCTTATGGAAGATGAAAGCCTGGCAGCTGCATATGCATTGTTAGATCACTTCTGTGAATTTATCCTTTCACAACTCTCCTATATCCTTAGGCACAAGTACCAAGAGGGCACACAACTACTTCCTTGGGCAACAAGAGTCAAAGTTGCTATTGGTGCTGCTCGTGGTCTCACCTTCCTACATGACTCTAAGCAACAAATTATTTACCGCGATTTCAAGGCTTCTAATATTTTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGATTGGCCAAAGCAGGGCCCACTGGTGATCGTTCTCATGTTTCCACTCAAGTCCTGGGCACTCAAGGCTAA 795 0.4491 MVALLIAFGASAGAVTDPSAQDPMGKMAATITASHGRKELVGYLAEVTTARFLVVAVRHSCMLFKQKKHVNPLYSSSTTWSLCYQQWCLEGVTFMKLWSRLASSVWSHKLFTLRTSKRAIKRARCRLRLLKNKKQAIVKQYKVAMGELEVEQLMEDESLAAAYALLDHFCEFILSQLSYILRHKYQEGTQLLPWATRVKVAIGAARGLTFLHDSKQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTQG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02392 264 FunFam Os07g0541700 protein 174 262 - -
Rops7g02392 264 SUPERFAMILY Protein kinase-like (PK-like) 133 263 IPR011009 -
Rops7g02392 264 ProSiteProfiles Protein kinase domain profile. 95 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02392 264 Gene3D Transferase(Phosphotransferase) domain 1 104 264 - -
Rops7g02392 264 Coils Coil 113 140 - -
Rops7g02392 264 PANTHER OS01G0588500 PROTEIN-RELATED 155 264 - -
Rops7g02392 264 Pfam Protein kinase domain 181 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02392 264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02392 Rops-Chr7 43041384 43045548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02392 164 264 Glycoside Hydrolase AT3G07070 50.980 2.01e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops7g02392 Pkinase 5.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02392 - - gmx:100791844 148.673