Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02387 ATGGTTCAAAGAAAGGTGCCAAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGATAAGGTTTTGGCAAACCTGAAACTATCTTCCTCTCAACACCATGATGGCAAAACTAGAGGAGCTGATATGAAGAAGAAAATGAAAAAGTCAAGGTCAATCAAACTTTCTGATCTTGAAGCTCTTCAATCATCACCAGCTTCAAGGAGAAGGTTATCCCAGCCAGAAAAACCACCACCACCTCTCCATGTTCCAACAACTTCAGCATCAGCAACACCATCACCACAGAAGCAGCATAATTTGGTGAGAATAACAAATGGTTCACCGAATTACATGAAGCCGACAAGCAGTTCTCATGCAAAAAAGGAGCTCTTCCCGGTGAGCCTTAGAAACACTCAATCTGGTTCTGATTTTAAGAATAAGCCAAGAAAATTTTCTAGTGATTCAAAAGCTACATGTGTTTCTAGTAAAAAGCCTGCAAAAACTCTGACAAGATCATCCAGTTTGAGTTTGGTGAGAACTTTGACAAAGACAACCAATTTCAAGGCTTCTAGAATTTGTCCCAAAAAATCCACCAGAGCTGCTCTATGTGCTGATATGAATGCAGCACCACATAAAGCTACTTGTTCTTCTACTTTGAAAGACTCAAAGTTCCCTGAATACCTCATGCTTAATCCTGGGGGAACTGAGTCAGAGGGAACTTCAGTGATGAAGGTTTGTTCATATAGTTATTGTTCTCTCAATGGTCATCATCATCATCATGCTGATTTGCCTCCATTGAAGAGCTTCGTGGCTTCAAGGAGGCGCCTTTTGAAGACCCAGAAGCGTGTGAAGCTGGAAGCTCTAAGCCCTCGAAGATTGAAGGTTCCATGTGAGACAAAGAAGGAGGACTCTGATATTGAGCAAAATTTCTTTGATGTAAAACCTGCATATGATGAAATTGGCATGGATATCTTTATTGAAATCTATGCTAATGAAAAGAATACACAAGCAACAGAAGAAATGGGAAAAGTAGATTTTCTCAAAGAGATTGAGGATCAAGAAGATATCAAGTCTACAATTGAGGATAAGAGTGTCATGGAATTTATTCCAAGCATTATTGATGCCCCTTCTCCTCCTGAGTTTAAGATTGATCTTGAGGAGGACTTGAAGAAATCCTTTGATGATGTTGCAGGTGAAGTAGATAACAAGGGGAGCTTTCTCCAAGAGCAAAATGCAGAAGAAGAAGATGAAGACCACCAAACTAGTTGGTCTCATGAAGAAATGAGTATGGGAAGCTACTACAGTGATGAGGAACACATGGATGATTCTGATTCCAAAGCAGATGATATGGAGAGAAAGGAAGAAGAATTTAATGGATTTGATCATGAAGAGGATGCTGATTCTTCTGTCTACTCAGAGGAGGACCCTGACTCAAAATTTGAATCCTTATCAGAGAATTCTCATGATGTGTCAGTGACATGGTTAGATGACATCCTTAGCAACTATTATGAGGAGATTCTTGTTGATGAAACACTCAAAGAAGCCAAATTGGAAGAAAGCACCAATTTTGAAGAACAATCTCATGGTATTAGTTCTGTCCTAGAAGACACAAGCGGAAGCACCGAGACCCAAAAAACTTGTCACCCCTCCAGTGACATGGGTTGTGATCAATCTTCTTTGACAGAGGAAATGTTTGAGTACCTGACAAATGCAGAGGATAATGGTGGAGAAAATGAAAAACATACGGATGATGAGGCCAGTTGCAACATGAAGGCATTTGATGAAGATACAATTGACAATAGCCAATGTCAGAAGATGAGTGAAATTTGCAAGATTGATGAGACCAGTGAAGATAGATGCTCAAGCCAAAAGAACAATGATGACAACAGTCATAGTGAGGAGAACCAAATTCATTTGTTTGATGTGCCTGAAGAAAGCATCAAAGCTGTTCAAGACCAGGAATTGTTGGAAAAAGATCAAGGCAAAGATGGTAAGTTCCAAAGGAGAAGCTGCATTGGTGGTGAAGAGCAAAACACAAGTGAAAATTGGAAACTTACAATTAGGAGAAAGAGGCAAGTTGAAGATGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAGCCAAATTTCCTGCCCTTGGTTCCGGAACCAGAACCACAAAAGGTTGACTTGAGGCATCAAATGATGGATGAGAGAAAGAATGCAGAGGAATGGATGCTTGATTCTGCACTAAGACAAGTTGTTACCAAACTTGCTCCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACTCTGATGGATGATGATCAGGTGAACCTAGTTGAAGTGTTATGTTGCACAGGAAGCATGGCCAATCTCCAAGAGTAA 2358 0.4025 MVQRKVPSKLGIQAEHVKSDKVLANLKLSSSQHHDGKTRGADMKKKMKKSRSIKLSDLEALQSSPASRRRLSQPEKPPPPLHVPTTSASATPSPQKQHNLVRITNGSPNYMKPTSSSHAKKELFPVSLRNTQSGSDFKNKPRKFSSDSKATCVSSKKPAKTLTRSSSLSLVRTLTKTTNFKASRICPKKSTRAALCADMNAAPHKATCSSTLKDSKFPEYLMLNPGGTESEGTSVMKVCSYSYCSLNGHHHHHADLPPLKSFVASRRRLLKTQKRVKLEALSPRRLKVPCETKKEDSDIEQNFFDVKPAYDEIGMDIFIEIYANEKNTQATEEMGKVDFLKEIEDQEDIKSTIEDKSVMEFIPSIIDAPSPPEFKIDLEEDLKKSFDDVAGEVDNKGSFLQEQNAEEEDEDHQTSWSHEEMSMGSYYSDEEHMDDSDSKADDMERKEEEFNGFDHEEDADSSVYSEEDPDSKFESLSENSHDVSVTWLDDILSNYYEEILVDETLKEAKLEESTNFEEQSHGISSVLEDTSGSTETQKTCHPSSDMGCDQSSLTEEMFEYLTNAEDNGGENEKHTDDEASCNMKAFDEDTIDNSQCQKMSEICKIDETSEDRCSSQKNNDDNSHSEENQIHLFDVPEESIKAVQDQELLEKDQGKDGKFQRRSCIGGEEQNTSENWKLTIRRKRQVEDDDDEMRKFNPKEPNFLPLVPEPEPQKVDLRHQMMDERKNAEEWMLDSALRQVVTKLAPARKKKVALLVEAFETLMDDDQVNLVEVLCCTGSMANLQE* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02387 785 MobiDBLite consensus disorder prediction 398 480 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 517 550 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 607 629 - -
Rops7g02387 785 Pfam Plant calmodulin-binding domain 659 763 IPR012417 GO:0005516
Rops7g02387 785 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 764 IPR044681 GO:0005516
Rops7g02387 785 SMART CaM_binding_2 651 764 IPR012417 GO:0005516
Rops7g02387 785 MobiDBLite consensus disorder prediction 23 158 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 512 550 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 424 477 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 56 70 - -
Rops7g02387 785 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02387 Rops-Chr7 42988057 42991382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02387 668 762 Calmodulin-binding Proteins AT2G38800 54.737 3.82e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02387 - - gmx:102660315 1031.17