Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02385 ATGTGGGATCCAACGGGAAGAACGTTGCAGTCAACAGGGATCTCAAGCGTGGTTTTGTGGCATCCAACTAAAAGGATGACAGGGGTTAGTTTAATGAAAGGTTTTGAGCAATGCTTGAGCTGGTTTAGGGTTTATTTTGAGGCTTTGAATGAGATCTTTCCGAAGACAAGCAACGAGCGTTTGATGCTTGAACATTCTATTGGAATCGTTGCTGTTTCCCGCAACTACAGTGGTGTAGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAGCCAACAAAGGTTGCCGAGATTCTTAAAGATCGGCCATCATGGTATCGTGACTGTCGATGCCTCGATGTGTTGAGTAGAGCCCCCACTGGTAATGGTGGCACGATGGAGCTCATGTACATGCAGACATATGCTCCCACAACATCGGCAGCACCAAGGGACTTTTGGACTCTAAGATACACTACGAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGACTTCTTCAACTGGTGGTCCCACTGGGCCTCCTCCTTCAAATTTTGTTAGAGCAGAGATGCTTCCTAGTGGCGTCAACAGTGCTGGCTCAGAAGACAACTATGGCGACCCTACGTCAGCTAAGGCAGATACCTTGATGGCTGATAACTTGCCAAAAGATGCCTCCATTGGGGTTGACCCATGGTGCATTTCAATTGATACTGCCCAAAGATGGGAGCATGCTTTAGCCAAAAAACAGCAGAAGCTGGTTCAAACGACAAAAAATTTGGTAGATGAAGTATGGACAGATCGCCCACTGACAGAAATTAATCCTGTAGTTATACAACCATTGAAATTTGCAGCACTTGATGAAGTTTCATGGTTGTATAATATACGTGGAAATGACGTGGCATACTGTCCTGTTGTTCATGCATTTGCTATTATGACATCCAATTCTGCTTTCATTTATGTTGACAAGCGAAAGGTGTCTGCTGAGGTAAAACCTCATTTAGAGGAGAATGGAATTGAAATTCGAGAGTACACAGCAGTAAGCTTTGATGTGGCATTGCTTGCAACTGATGAGCTTGATGCTACATCTTCCGCCAAAGATACTCGAGCTGAAGTTACAAAGGAGGCTGGAAAAGTTCCCAGTGAAACCAATAAGAGCCAATCACCCTTGGCTCTTGCAAAAGCTTTAAAGAACCCAGTAGAATTGGATGGGTTAAGAAAGGCACATATTCGGGATGGTGTAACCCATCATGGTCTTACGCTCTAG 1248 0.4487 MWDPTGRTLQSTGISSVVLWHPTKRMTGVSLMKGFEQCLSWFRVYFEALNEIFPKTSNERLMLEHSIGIVAVSRNYSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSRAPTGNGGTMELMYMQTYAPTTSAAPRDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPPSNFVRAEMLPSGVNSAGSEDNYGDPTSAKADTLMADNLPKDASIGVDPWCISIDTAQRWEHALAKKQQKLVQTTKNLVDEVWTDRPLTEINPVVIQPLKFAALDEVSWLYNIRGNDVAYCPVVHAFAIMTSNSAFIYVDKRKVSAEVKPHLEENGIEIREYTAVSFDVALLATDELDATSSAKDTRAEVTKEAGKVPSETNKSQSPLALAKALKNPVELDGLRKAHIRDGVTHHGLTL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02385 415 SUPERFAMILY Bet v1-like 67 190 - -
Rops7g02385 415 MobiDBLite consensus disorder prediction 358 382 - -
Rops7g02385 415 ProSiteProfiles START domain profile. 41 189 IPR002913 GO:0008289
Rops7g02385 415 Gene3D - 198 259 IPR029149 -
Rops7g02385 415 Gene3D - 273 384 IPR029149 -
Rops7g02385 415 SMART START_1 43 250 IPR002913 GO:0008289
Rops7g02385 415 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 65 189 IPR044830 GO:0003700
Rops7g02385 415 Pfam Creatinase/Prolidase N-terminal domain 278 395 - -
Rops7g02385 415 Pfam START domain 61 190 IPR002913 GO:0008289
Rops7g02385 415 MobiDBLite consensus disorder prediction 358 372 - -
Rops7g02385 415 Gene3D - 63 197 IPR023393 -
Rops7g02385 415 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02385 Rops-Chr7 42957724 42959597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02385 66 189 Homeobox Transcription Factor Family AT2G34710 80.645 6.62e-62 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02385 K01262 - gmx:100810683 278.485