Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02378 ATGGAAAGCCGTCAGGTGCTCATGCTAATGGTGTATATTTTCCTCTTTTGCTCCATGCTCACTTTCTCAAAACAGGAAACTGTTACTATTGCTCCAAATCAGCCTATCCATCATCATGAGACACTTGTTTCTGCATCTGGAACCTTTGAAGCAGGATTCTTCAACTTTACAAATCCACAACGCCAATATTTTGCCGTGGACATCCTCCGTTTGTCTCTATCGCCTTCGTCTGGTGAGCTTTTCCTTCTCTTCGTATCTGTTATGCGTGTCTTGGCTTGTGAGTGGCACAGAGATGCCCCAGTACTAAACTCAACACCAACGTTGAAACTTACTGATCAGGGAAAACTTGTCATTCTAGATGGCTCTGGAGGCATGATATGGTACTCCAATTCAACAAGAATTGCTGTGAAGCCAGTTTTGCAGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGACAGCACAGAGAATTTGTTGTGGGAAAGCTTTGATTATCCTGGTGACACTTTTCTTGCAGGAATGAAGCTGAAAAGCAATTTAGTTACAGGGCCATATAAGTATCTCACATCTTGGAGAAACCCTGATGATCCTGCTCAAGGTGAGTTTTCATATAGGATAGATATTCATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAACAATTCGGTATAGAGAAGGGTCATGGAATGGCTTTCTTCTTACTGGAGTTTCCTGGCACAGATATCGTAGAATCTTTAATTCCTCATTAGAGCTTACTGACAAAGAAGTTTCTTATGAATATCAAACTTTGAACAGTTCAGTAGTTACTAGAATGATGCTTGATCCATCAGGAACTTCACAAAGTTTTATATGGTCAGATAGGACACAAACTTGGGAGATTATAGGTTTTATACCAAAGTTTCAAGCAAAGTGGGATTCAGCAGATTGGTCTGATGGGTGTGTCAGGAGAATAAAATTGAATTGTCTTAATGGATATGGCTTTCTGAAGTATACAGGCATGAAGTTACCAGACACATCTTCATCCTGGTTTGACAAGATCTTGAACCTTGAGGACTGTGAGACATTGTGTTTGAAAAATTGCTCTTGCACTGCATATGCAAATATAGATATCAGAGGTGGTGGGAGTGGCTGCTTGCGTTGGTTTGATAACATTGTGGACATGAGAAAACACACAGACCAAGGACAAGACATTTACATACGGCTAGCATCTTCAGAATTAGATCATAGAAAGAATAAGGATATAAAGAAGCTTGCCGGGACTCTAGCAGGAATTATTGCATTTGTTATAGTACTGACAGTCCTTGTATTGGCCAGATCAACATGTATAAAAAGGAAGAAGCTTGGGATTGTAAAAAGGTTAATTCACTGGAAGCACCAGAAGGAGAAGGAAGATGATGACTTGCCAACAATGTTTGATTTTTCAACCATCACCAATGCCACAAATTACTTTTCTATCAGTAACAAGTTAGGAGAAGGTGGCTTTGGACCGGTATACAAGGGCATATTGGCAGATGGACAAGAGATTGCTGTTAAGAGGCTTTCAAAAACTTCAAGACAAGGAACTGAGGAGTTAAGAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTAGTAAAACTTCTTGGTTGTTCTATTGAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTCATTTTTGATACTATGCGAAGCAAATTGTTAGATTGGACCAAGCGCACGGAAATTATTGATGGGATTGCTCGAGGGCTTTTGTATCTGCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAAACAAGCAATATTCTTCTTGATATTAATATGATTCCAAAGATATCAGATTTTGGTTTAGCCAGAACATTTAAAGGAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATACCTCCAGAATATGCAGTACATGGATCTTTCTCAATCAAATCTGATGTTTTTAGCTTTGGTGTCATTGTAATTGAGATAATTAGCGGGAGGAAGAATCGTGGATTTTGTGACCCTCAACATCATCTTAACCTTATTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAATGGAGTTAATAGATGACATATTAGCTGATGATTTGGTCATACGTTCAGAAATATTAAGATGTATTCAAGTGGGTCTATTATGTGTACAACAACAACCAGAAAATAGGCCAAACATGTCATCAGTGGTGTTAATGTTAAAGGGTGAAAAGTTACTCCCCCAACCAAGCCAGCCCGGATTCTACACAGGAAGCGACAATACAATTCACACAGGACCTTCTTCAAAAAAAATTGAAGTGTGTTCAGTAAATGAAGCTTCGATCTCATTGTTAGAGGCACGATAG 2415 0.3909 MESRQVLMLMVYIFLFCSMLTFSKQETVTIAPNQPIHHHETLVSASGTFEAGFFNFTNPQRQYFAVDILRLSLSPSSGELFLLFVSVMRVLACEWHRDAPVLNSTPTLKLTDQGKLVILDGSGGMIWYSNSTRIAVKPVLQLLDSGNLVVKDGDSTENLLWESFDYPGDTFLAGMKLKSNLVTGPYKYLTSWRNPDDPAQGEFSYRIDIHGFPQLVTAKGATIRYREGSWNGFLLTGVSWHRYRRIFNSSLELTDKEVSYEYQTLNSSVVTRMMLDPSGTSQSFIWSDRTQTWEIIGFIPKFQAKWDSADWSDGCVRRIKLNCLNGYGFLKYTGMKLPDTSSSWFDKILNLEDCETLCLKNCSCTAYANIDIRGGGSGCLRWFDNIVDMRKHTDQGQDIYIRLASSELDHRKNKDIKKLAGTLAGIIAFVIVLTVLVLARSTCIKRKKLGIVKRLIHWKHQKEKEDDDLPTMFDFSTITNATNYFSISNKLGEGGFGPVYKGILADGQEIAVKRLSKTSRQGTEELRNEVKLMATLQHRNLVKLLGCSIEQDEKLLIYEFMPNRSLDYFIFDTMRSKLLDWTKRTEIIDGIARGLLYLHQDSTLRIIHRDLKTSNILLDINMIPKISDFGLARTFKGDQAEANTNRVMGTYGYIPPEYAVHGSFSIKSDVFSFGVIVIEIISGRKNRGFCDPQHHLNLIGHAWRLWIEERPMELIDDILADDLVIRSEILRCIQVGLLCVQQQPENRPNMSSVVLMLKGEKLLPQPSQPGFYTGSDNTIHTGPSSKKIEVCSVNEASISLLEAR* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02378 804 Gene3D Transferase(Phosphotransferase) domain 1 561 764 - -
Rops7g02378 804 Pfam PAN-like domain 326 389 IPR003609 -
Rops7g02378 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 561 765 - -
Rops7g02378 804 CDD B_lectin 33 167 IPR001480 -
Rops7g02378 804 Pfam D-mannose binding lectin 97 193 IPR001480 -
Rops7g02378 804 Pfam Protein tyrosine and serine/threonine kinase 487 754 IPR001245 GO:0004672|GO:0006468
Rops7g02378 804 SMART serkin_6 485 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02378 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 560 - -
Rops7g02378 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Rops7g02378 804 ProSiteProfiles PAN/Apple domain profile. 323 404 IPR003609 -
Rops7g02378 804 CDD STKc_IRAK 491 759 - -
Rops7g02378 804 Gene3D Phosphorylase Kinase; domain 1 448 560 - -
Rops7g02378 804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 748 - -
Rops7g02378 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 198 IPR036426 -
Rops7g02378 804 ProSiteProfiles Protein kinase domain profile. 485 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02378 804 Gene3D Hepatocyte Growth Factor 320 405 - -
Rops7g02378 804 CDD PAN_AP_plant 320 404 - -
Rops7g02378 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 322 403 - -
Rops7g02378 804 SMART blect_4 33 167 IPR001480 -
Rops7g02378 804 SMART ntp_6 324 403 IPR003609 -
Rops7g02378 804 SUPERFAMILY Protein kinase-like (PK-like) 469 757 IPR011009 -
Rops7g02378 804 Gene3D - 20 164 IPR036426 -
Rops7g02378 804 ProSiteProfiles Bulb-type lectin domain profile. 27 163 IPR001480 -
Rops7g02378 804 Pfam S-locus glycoprotein domain 225 302 IPR000858 GO:0048544
Rops7g02378 804 PIRSF SRK 1 297 IPR024171 GO:0004674
Rops7g02378 804 PIRSF SRK 295 804 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02378 Rops-Chr7 42616304 42621623 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02378 324 772 Receptor kinase-like Gene Family AT4G23190 44.703 1.06e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02378 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02378 - - tpra:123915365 1097.8