Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02377 ATGCCTCCAGAATATGCAGCACATGGATCTTTGTCAATCAAATCTGATGTTTTTAGCTTTGGTGTCATTGTAATTGAGATAATTAGCGGGAGGAAGAATCGTGGATTTTGTGACCCTCAACATCATCTTAACCTTATTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAATGGAGTTAATAGATGACATGTTAGCTGATGATGTGGCCATACCTTCAGAAATATTAAGATATATTCAAGTGGGTCTATTATGTGTACAACAGCAACCAGAAAATAGGCCAAACATGTCATCAGTGGTGTTAATGTTAAAGGGTGAAAAGTTACTCCCCCAACCAAGCCAGCCCGGATTCTACACAGGAAGAGATAATACAAATCACACAGGACCTTCTTCGAAAAAATTTGAAGGGTGTTCAGTAAATGAAGCTTCGATTACATTGTTAGAGGCACAATAG 456 0.3904 MPPEYAAHGSLSIKSDVFSFGVIVIEIISGRKNRGFCDPQHHLNLIGHAWRLWIEERPMELIDDMLADDVAIPSEILRYIQVGLLCVQQQPENRPNMSSVVLMLKGEKLLPQPSQPGFYTGRDNTNHTGPSSKKFEGCSVNEASITLLEAQ* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02377 151 MobiDBLite consensus disorder prediction 113 135 - -
Rops7g02377 151 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Rops7g02377 151 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Rops7g02377 151 MobiDBLite consensus disorder prediction 117 135 - -
Rops7g02377 151 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02377 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 149 - -
Rops7g02377 151 SUPERFAMILY Protein kinase-like (PK-like) 1 116 IPR011009 -
Rops7g02377 151 Pfam Domain of unknown function (DUF3403) 110 150 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02377 Rops-Chr7 42601178 42602286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02377 1 148 Receptor kinase-like Gene Family AT4G23140 43.791 1.45e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02377 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02377 - - tpra:123915365 231.491