Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02376 ATGGAGAGCCGTAAAGTGCTCATGCTAATGGTGTATATTTTCCTTTTTTGCTCCATGCTCACTTTCTCAAAACAGGAAACTGTCACTATTGCTCCAAATCAGCCTTTCCATCATCATGAGACACTTGTTTCTGCATCTGGAAACTTTGAAGCAGGATTCTTCAACTTTACAAATCCACAACGCCAATATTTTGGTATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAACAGAGATGCCCCAGTACAAAACTCAACACCAACGTTGAAACTTACTGATCAGGGAAAACTTGTTATTCTAGATGGCTCTACAGGCATGATATGGTACTCCAATTCATCAAGAATTGCTGTGAAGCCAGTTTTGCAGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGACAGAACAAAGAATTTGTTGTGGGAAAGCTTTGATTATCCTGGTGACACTTTTCTTGCAGGAATGAAGCTGAAAAGCAATTTAGTTACAGGGCCATATAAGTATCTCACATCTTGGAGAAACCCTGATGATCCTACTGAAGGTGAGTTTTCATATCGGATAGATATTCATGGTTTTCCTCAACTGGTTACTGCAAAGGGAGCAACAATTCGGTATAGAGCAGGGTCATGGAATGGCTTTCTTTTTACTGGAGCTTCCTGGCAAAGAATGCGTAGAATCTTGAATTTCTCATTAGAGCTTACTGACAAAGAAGTTTCTTATGAATATCAAACTTTGGACAGTTCAGTAGTTACTAGAATGATGCTTGGTCCATCAGGAACTTCACAATGTTTTCTATGGTCAGATAGGACACAAACTTGGGAGATTATAGATACTCGTCCTGTGGACCAGTGTGAATATTATGCCATGTGTGGTGACAACTCTAACTGCAATATAAATGACCTTCCACCATGTGAATGCTTGAAAGGTTTTATACCAAAGTTTCAAGCAAAGTGGGATTCAGAAGATTGGTCTGATGGGTGTGTCAGGAGAACAAAATTGAATTGTCTTAATGGAGATGACTTTCTGAAGTATACAGGCGTGAAGTTACCAGACACATCTTCATCCTGGTTTGACAAGAGCTTAAGCCTTGAGGACTGTGAGACATTGTGTTTGAAAAACTGCTCTTGCACTGCATATGCAAATTTAGATATCAGAAGTGGTGGAAGTGGCTGCTTGCTTTGGTTTGATAACATTGTGGACATGAGAAAACACACAGACCAAGGACAAGACATTTACATACGGCTAGCATCTTCAGAATTAGATCATAGAAAGAATAAGGATATAAAGAAGCTTGCCGGGACTCTAGCAGGAATTATTGCATTTGTTATAGTACTGATAGTCCTTGTAATGGCCAGATCAACATGTATAAAAAGGAAGAAGCTTGGGATTGTAAAAAAGTTAATTCACTGGAAGCACCAAAAGGAGAAGGAAGATGATGACTTGCCAACAATATTTGATTTTTCAACCATCACCAATGCCACAAATTACTTTTCTATTAGTAACAAGTTAGGAGAAGATGGACAAGAGATTGCTGTTAAGAGGCTTTCAAAAACTTCAGGACAAGCAACTGAGGAGTTAAAAAATGAAGTAAAGTTGATGGCAACACTTCAACACCGTAATCTAGTAAAACTTCTTGGTTGTTCTATTGAACAAGATAAGAAGTTGTTGATCTATGAACTCATGTCCAACAGAAGCTTGGATTACTTCATTTTTGATACTATGCGTAGCAAATTGTTAGATTGGACCAAGCGCATGGAAATTATTGATGGGATTGCTCGAGGGCTTTTGTATCTGCATCAAGATTCTACACTAAGAATCATACATAGAGATCTCAAAACAAGCAATATTATTCTTGATATTAATATGATTCCAAAGATATCAGATTTTGGTTTAGCCAGAACATTTAAAGGAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGGACATAG 1968 0.3826 MESRKVLMLMVYIFLFCSMLTFSKQETVTIAPNQPFHHHETLVSASGNFEAGFFNFTNPQRQYFGIWYKSISPRTIVWVANRDAPVQNSTPTLKLTDQGKLVILDGSTGMIWYSNSSRIAVKPVLQLLDSGNLVVKDGDRTKNLLWESFDYPGDTFLAGMKLKSNLVTGPYKYLTSWRNPDDPTEGEFSYRIDIHGFPQLVTAKGATIRYRAGSWNGFLFTGASWQRMRRILNFSLELTDKEVSYEYQTLDSSVVTRMMLGPSGTSQCFLWSDRTQTWEIIDTRPVDQCEYYAMCGDNSNCNINDLPPCECLKGFIPKFQAKWDSEDWSDGCVRRTKLNCLNGDDFLKYTGVKLPDTSSSWFDKSLSLEDCETLCLKNCSCTAYANLDIRSGGSGCLLWFDNIVDMRKHTDQGQDIYIRLASSELDHRKNKDIKKLAGTLAGIIAFVIVLIVLVMARSTCIKRKKLGIVKKLIHWKHQKEKEDDDLPTIFDFSTITNATNYFSISNKLGEDGQEIAVKRLSKTSGQATEELKNEVKLMATLQHRNLVKLLGCSIEQDKKLLIYELMSNRSLDYFIFDTMRSKLLDWTKRMEIIDGIARGLLYLHQDSTLRIIHRDLKTSNIILDINMIPKISDFGLARTFKGDQAEANTNRVMGT* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02376 655 Pfam Protein tyrosine and serine/threonine kinase 507 646 IPR001245 GO:0004672|GO:0006468
Rops7g02376 655 ProSiteProfiles Protein kinase domain profile. 455 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02376 655 SMART serkin_6 502 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02376 655 SMART ntp_6 341 420 IPR003609 -
Rops7g02376 655 Pfam PAN-like domain 340 406 IPR003609 -
Rops7g02376 655 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Rops7g02376 655 Pfam D-mannose binding lectin 75 178 IPR001480 -
Rops7g02376 655 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 649 - -
Rops7g02376 655 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Rops7g02376 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 566 655 - -
Rops7g02376 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Rops7g02376 655 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Rops7g02376 655 Gene3D Hepatocyte Growth Factor 337 422 - -
Rops7g02376 655 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Rops7g02376 655 SMART blect_4 33 152 IPR001480 -
Rops7g02376 655 SUPERFAMILY Protein kinase-like (PK-like) 489 655 IPR011009 -
Rops7g02376 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 420 - -
Rops7g02376 655 CDD PAN_AP_plant 336 421 - -
Rops7g02376 655 CDD B_lectin 40 152 IPR001480 -
Rops7g02376 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Rops7g02376 655 Gene3D Phosphorylase Kinase; domain 1 475 565 - -
Rops7g02376 655 Gene3D Transferase(Phosphotransferase) domain 1 566 655 - -
Rops7g02376 655 Gene3D - 20 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02376 Rops-Chr7 42598207 42601004 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02376 426 655 Receptor kinase-like Gene Family AT4G23190 47.581 1.22e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02376 PK_Tyr_Ser-Thr 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02376 - - gmx:100819820 1000.35