Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02375 ATGATTCCAAAGATATCAGATTTTGGTTTAGCCAGAACATTTAAAGGAGATCAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCAGAATATGCAGTGCATGGATCTTTCTCAATCAAATCTGATGTTTTTAGCTTTGGTGTCATTGTAATTGAGATAATTAGCGGGAGGAAGAATCGTGGATTTTGTGACCCTCAACATCATCTTAACCTTCTTGGTCATGCATGGAGACTATGGATTGAAGAAAGGCCAATGGAGTTAATAGATGACATATTAGCTGATGATGTGGCCATACCTTCAGAAATATTAAGACGTATTCAACCTCTTCAGGCTTACAACAAGTATTCTTTTACTGCAGTAGCCTCTCCAGGCTTTGCACCACAAGTATTCTTGACACTAGCCTATACAGGCTTTACACCACAAGTATTCTTTGATCACAGCCTCTTCAGGCTAACACCAAGTATTCTTTTACCACAGCCTCTTCAGGCTTACACCAAGTATTCTTTTACTGCAGTAGCCTCTCCAGGCTTTGCACCACAAGTATTCTTGACACTAGCCTCTACAGGCTCAACACCATATTTGGGTTTTACTAATGTGTGA 618 0.4013 MIPKISDFGLARTFKGDQAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVIEIISGRKNRGFCDPQHHLNLLGHAWRLWIEERPMELIDDILADDVAIPSEILRRIQPLQAYNKYSFTAVASPGFAPQVFLTLAYTGFTPQVFFDHSLFRLTPSILLPQPLQAYTKYSFTAVASPGFAPQVFLTLASTGSTPYLGFTNV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02375 205 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02375 205 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 103 - -
Rops7g02375 205 Pfam Protein tyrosine and serine/threonine kinase 4 84 IPR001245 GO:0004672|GO:0006468
Rops7g02375 205 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Rops7g02375 205 SUPERFAMILY Protein kinase-like (PK-like) 2 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02375 Rops-Chr7 42562558 42566044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02375 1 113 Receptor kinase-like Gene Family AT4G23230 53.097 2.88e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02375 PK_Tyr_Ser-Thr 9.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02375 - - tpra:123915364 193.356