Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02374 ATGGAGAGCCATAAGGTGCTCAGTGTAATGGTGTATATTTTCCTCTCTTGCTCCATTCTCACTTTCTCAAAACAGGAAACTGTTACTATTGCTCCAAATCAGCCTATCCAAAATCATGAGACACTTGTTTCTCCAGCTGGAACCTTTCAAGCAGGATTCTTCAACTTTGGAAATCCACAACGCCAATACTTTGGTATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAATAGAGATATCCCAGTTCAAAACACAATAGCAATGTTGAAACTTACTGATCAGGGAAAACTTGTCATTCTAGATGGCTCTAGAGGCATGATATGGTACTCCAATTCATCAAGAATTGCTGTGAAGCCAGTTTTGCAGCTTTTAGATTCAGGAAACCTTGTTGTGAAAGATGGAGACAGCACAGAGAATTTGTTGTGGGAAAGCTTTGATTACCCTGGTGACACTTTTCTTGCAGGAATGAAGCTGAAAAGCAATTTACTTACAGGGCCATATAAGTATCTCACATCTTGGAGAAACCCTGATGATCCTGCTGAAGGTGAGTATTCATATCGGATAGATATTCATGGTTTTCCTCAATTGGTTACTGCAAAGGGAGCAACAATTCTGTATAGAGCAGGGTCATGGAATGGCTATCTTTTCACTGGAGTTTCCTGGCAAAGAATGCATAGAATCCTGAATTTCTCATTAGAGTTTAATAACAAAGAAGTTTCTTATGAATATGAAACTTTGGAGAATTCAGTAATTACTAGAATGATGCTTGGTCCATCGGGAACTTCACAACGCTTTTTATGGTCAAATGGGACACAAACTTGGGAGATTATAGCTACTCGTCCTGTAGACCAGTGTGAATATTATGCCATGTGTGGTGTCAACGCTAACTGCAATATTAATGACCTTCCACTATGTGAATGCTTGAAAGGTTTTATACCAAAGTTTCAAGCAAAGTGGGATTCAGCAGATTGGTCTGATGGGTGTGTCAGGAGAACAAAATTGAATTGTCTTAATGGAGATGGCTTTCTGAAGTATACAGGCATGAAGTTGCCAGACACATCTTCATCCTGGTTTGACAAGAACTTGAGCCTTGAGGACTGTGAGACATTGTGTTTGAAAAACTGTTCTTGCACTGCATATGCAAATTTAGATATCAGAAGTGGTGGGAGTGGTTGCTTGCTTTGGTTTGATAACATTGTGGACATGAGAAAACACGCAGACCAAGGACAAGACATTTACATACGGCTAGCATCTTCAAAATTAGATCATAGAAAGAATAAGGATATAAAGAAGCTTGCCGGGACTCTAGCAGGAATTATTGCATTTGTTATAGTACTGACAGTCCTTGTATTGGCCAGATCAACATGTATAAAAAGGAAGAAGCTTGGGATTGTAAAAAAGTTAATTCACTGGACGCAGCAGAAGGAGAAGGAAGATGATGACTTGCCAACAATATTTGATTTTTCAACCATCACCAATGCCACAAATTACTTTTCTATCAGTAACAAGTTAGGAGAAGGTGGCTTTGGACCGGTATACAAGGGCATATTGGCAGATGGACAAGAGATTGCTGTTAAGAGGCTTTCAAAAACTTCAGGACAAGGAACTGAGGAGTTAAAAAATGAAGTGAAGTTGATGGCAACACTTCAACACCGAAATCTAGTAAAACTTCTTGGTTGTTCTATAGAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACTTTGCGAAGCAAATTGTTAGATTGGACCAAGCGAATGGAAATTATTGATGGGATTGCTTGA 1830 0.3907 MESHKVLSVMVYIFLSCSILTFSKQETVTIAPNQPIQNHETLVSPAGTFQAGFFNFGNPQRQYFGIWYKSISPRTIVWVANRDIPVQNTIAMLKLTDQGKLVILDGSRGMIWYSNSSRIAVKPVLQLLDSGNLVVKDGDSTENLLWESFDYPGDTFLAGMKLKSNLLTGPYKYLTSWRNPDDPAEGEYSYRIDIHGFPQLVTAKGATILYRAGSWNGYLFTGVSWQRMHRILNFSLEFNNKEVSYEYETLENSVITRMMLGPSGTSQRFLWSNGTQTWEIIATRPVDQCEYYAMCGVNANCNINDLPLCECLKGFIPKFQAKWDSADWSDGCVRRTKLNCLNGDGFLKYTGMKLPDTSSSWFDKNLSLEDCETLCLKNCSCTAYANLDIRSGGSGCLLWFDNIVDMRKHADQGQDIYIRLASSKLDHRKNKDIKKLAGTLAGIIAFVIVLTVLVLARSTCIKRKKLGIVKKLIHWTQQKEKEDDDLPTIFDFSTITNATNYFSISNKLGEGGFGPVYKGILADGQEIAVKRLSKTSGQGTEELKNEVKLMATLQHRNLVKLLGCSIEQDEKLLIYEFMPNRSLDYFIFDTLRSKLLDWTKRMEIIDGIA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02374 609 Pfam Protein tyrosine and serine/threonine kinase 504 590 IPR001245 GO:0004672|GO:0006468
Rops7g02374 609 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 420 - -
Rops7g02374 609 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Rops7g02374 609 Pfam D-mannose binding lectin 75 178 IPR001480 -
Rops7g02374 609 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Rops7g02374 609 SMART tyrkin_6 502 608 IPR020635 GO:0004713|GO:0006468
Rops7g02374 609 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Rops7g02374 609 ProSiteProfiles Protein kinase domain profile. 502 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02374 609 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 605 - -
Rops7g02374 609 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Rops7g02374 609 Pfam PAN-like domain 340 406 IPR003609 -
Rops7g02374 609 Gene3D Hepatocyte Growth Factor 337 422 - -
Rops7g02374 609 SUPERFAMILY Protein kinase-like (PK-like) 485 609 IPR011009 -
Rops7g02374 609 SMART ntp_6 341 420 IPR003609 -
Rops7g02374 609 CDD PAN_AP_plant 336 421 - -
Rops7g02374 609 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Rops7g02374 609 CDD B_lectin 33 152 IPR001480 -
Rops7g02374 609 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Rops7g02374 609 SMART blect_4 33 152 IPR001480 -
Rops7g02374 609 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Rops7g02374 609 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Rops7g02374 609 Gene3D - 20 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02374 Rops-Chr7 42559852 42562473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02374 426 609 Receptor kinase-like Gene Family AT4G23190 47.895 2.46e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02374 S_locus_glycop 1.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02374 - - gmx:100819820 937.947