Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02373 ATGCAGACATACAAGGTGCTAATGTTAATGGTGCACTTTTTCTTCTTCTTTTTCTGCTTCATTCCCATTCTATCTATACATGGCACTGTTTCTATTACCCCAAATGAGTCTATCCAACGAAATGAGACCCTGGTCTCTAGAGGTGGAAATTTTGAAGCTGGATTCTTCAACTTTGGAGATCCACAACTCCAATACTTTGGTATATGGTACAAGAGCATATCACCCAGGACTTATGTTTGGGTTGCCAACAGGGATGCTCCAGTACAAAACTCAACAGCAATTCTGAAACTTACTGATCAAGGAAATCCTGTTATTCTTGATGGATCTAAGGGCATAGTGTGGTCCTCCAATGAATCAAGAATTGCACAGAAACCAGTCATGCAGCTTGTAGATTCTGGAAACCTTGTTGTGAAAGATGGAGAGAAAATTTTGTGGGAGAGTTTTGATTACCCTGGTGATACTTTCCTTGCAGGAATGAAACTCAAGACAAATTTGGTTACTGGTTCTTATATGTCTCTCACATCTTGGAGAAACACAGAAGATCCTTCTGTTGGTGAGTTTTCATATTACATAGATCCTCATGGCTTTCCTCAATTGGTTACTACAAAGGGAGTAACTTTCTTTAGCAGAGGAGGGTCATGGAATGGCTATGTTTTTAATGGAATTTCATGGATAAGAAATCTTAAATTGTTCAATTTTTCTCTGGTGTTTACTGATAAAGAAGTCTCTTATGAATATCAAACCTTGAACAAGGAAACTGTTACTAGATTAATGCTCAATTCAAATGGCTTTGCGCAACGATTGACATGGTCAGATAGGAAAGGAGTTTGGGAGGTTATATCTACTCGTCCCATGGATCAGTGTGAATATTATTCCTATTGTGATGCTAATTCTATCTGCAATGTTACTAACTCTCCAAGATTATGTCAATGCTTGGAAGGTTTCATACCCAAATTCCAAGAAAACTGGAATTCATTAAGTTGGTCTGGTGGGTGTGTTAGAAGAATAAGCTTAAATTGTAGTAGTGATGGGTTTCTGAAGTACTCAGGAATTAAATTGCCAGATACCTCATCTTCCTGGTATGACAAGAGCTTGAGCCTTGAGAAATGTAAGACTTTGTGTTTGAAAAATTGCTCTTGTACTGCATATGCAACTTTAGATGTCAAAGTTAAGAGTGGCTGCTTGCTTTGGTTTGGTAACATTCTGGACATGACAAAACACACAGACCAAGGGCAAGATATATTCATAAGACTTGCAGCTTCAGAGTTAGATCATAGAAGGAATGAGGGGGACTTTAGTAACAAGAAGCTTGCTGGGATACTAGTAGGAATCGTTATATTCATCATGGTTCTTGGACTGACCATATTCATATGTATAAAGAGGAAGAAGCTTGCAAAGCCAGGAATGCTAGAATTATTTAAGTGGAAGTATAAAAGGGAGAAGGAAGATGTGGAGTTATCAACAATATTTGATTTTTCTACCATCTCTAATGCCACAAATCACTTTTCAAACAGTAACAAGTTAGGAGAAGGTGGCTTTGGACCAGTATACAAGGGCATATTGGAAGATGGGCAAGAGATTGCAGTCAAGAGGCTGTCAAAAACTTCTGATCAAGGAGCAGAACAGTTCAAAAATGAAGTCATGTTGATGGCAAAACTTCAGCACCGCAATCTTGTTAAACTTTTTGGTTGTTCTATTCACCATGATGAAAAGCTTTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATTCAACTCAAAGTAAACAACTAGATCTGACAAAACGCTTCCAAATTATTGATGGTGTTGCTCGAGGGCTACTCTATCTTCATCAAGACTCTAGATTAAGAATCATCCACAGAGACCTCAAAGCCAGTAATATTCTTCTTGATAACAATATGAATCCAAGGATATCAGATTTTGGTCTGGCTAGAACATTTAGAGGAGATGAAGCTGAGGCCAATACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCGGTTCATGGATCTTTTTCAATCAAATCTGATGTATTTAGCTTTGGTGTAATTGTACTGGAGATAATTAGTGGGAGAAAGAATCGGATTTTTCATGATCCTCAGCATCATCTTAATCTTCTTGGTCATGCATGGAGACTGTGGACTGAAGACAAGCCACTAGAGCTAGTGGACGATTTATTCCATTATACAACAACTCCACCTGAAATATTGAGATGTATTCATGTGGGTCTACTATGTGTACAACAAACACCAGAAACAAGACCAATCATGTCATCTGTGGTTTTAATGTTGAATGGTGAAAAATTGTTGCCTGAGCCAAGTCCACCTGGGTTCTACACAGGAACAGAACATCATCCAATTCAGGTAGAATCTTCTTCAAAAAGTTATGGAGATTGTTCACAAAATGATGCTTCTGTGTCGTTGTTAGAGGGACGATAG 2466 0.3808 MQTYKVLMLMVHFFFFFFCFIPILSIHGTVSITPNESIQRNETLVSRGGNFEAGFFNFGDPQLQYFGIWYKSISPRTYVWVANRDAPVQNSTAILKLTDQGNPVILDGSKGIVWSSNESRIAQKPVMQLVDSGNLVVKDGEKILWESFDYPGDTFLAGMKLKTNLVTGSYMSLTSWRNTEDPSVGEFSYYIDPHGFPQLVTTKGVTFFSRGGSWNGYVFNGISWIRNLKLFNFSLVFTDKEVSYEYQTLNKETVTRLMLNSNGFAQRLTWSDRKGVWEVISTRPMDQCEYYSYCDANSICNVTNSPRLCQCLEGFIPKFQENWNSLSWSGGCVRRISLNCSSDGFLKYSGIKLPDTSSSWYDKSLSLEKCKTLCLKNCSCTAYATLDVKVKSGCLLWFGNILDMTKHTDQGQDIFIRLAASELDHRRNEGDFSNKKLAGILVGIVIFIMVLGLTIFICIKRKKLAKPGMLELFKWKYKREKEDVELSTIFDFSTISNATNHFSNSNKLGEGGFGPVYKGILEDGQEIAVKRLSKTSDQGAEQFKNEVMLMAKLQHRNLVKLFGCSIHHDEKLLIYEFMPNRSLDYFIFDSTQSKQLDLTKRFQIIDGVARGLLYLHQDSRLRIIHRDLKASNILLDNNMNPRISDFGLARTFRGDEAEANTNRVMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEIISGRKNRIFHDPQHHLNLLGHAWRLWTEDKPLELVDDLFHYTTTPPEILRCIHVGLLCVQQTPETRPIMSSVVLMLNGEKLLPEPSPPGFYTGTEHHPIQVESSSKSYGDCSQNDASVSLLEGR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02373 821 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Rops7g02373 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 577 - -
Rops7g02373 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Rops7g02373 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 764 - -
Rops7g02373 821 SUPERFAMILY Protein kinase-like (PK-like) 487 793 IPR011009 -
Rops7g02373 821 SMART blect_4 35 151 IPR001480 -
Rops7g02373 821 CDD PAN_AP_plant 338 419 - -
Rops7g02373 821 MobiDBLite consensus disorder prediction 799 821 - -
Rops7g02373 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 148 - -
Rops7g02373 821 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Rops7g02373 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 182 IPR036426 -
Rops7g02373 821 CDD B_lectin 41 151 IPR001480 -
Rops7g02373 821 Gene3D - 27 148 IPR036426 -
Rops7g02373 821 Pfam D-mannose binding lectin 77 177 IPR001480 -
Rops7g02373 821 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Rops7g02373 821 CDD STKc_IRAK 508 775 - -
Rops7g02373 821 CDD TM_EGFR-like 437 466 - -
Rops7g02373 821 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Rops7g02373 821 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Rops7g02373 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Rops7g02373 821 SMART serkin_6 502 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02373 821 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672|GO:0006468
Rops7g02373 821 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02373 821 Gene3D Hepatocyte Growth Factor 338 417 - -
Rops7g02373 821 SMART ntp_6 340 418 IPR003609 -
Rops7g02373 821 Pfam PAN-like domain 340 404 IPR003609 -
Rops7g02373 821 ProSiteProfiles PAN/Apple domain profile. 340 419 IPR003609 -
Rops7g02373 821 PIRSF SRK 1 821 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02373 Rops-Chr7 42550333 42554221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02373 438 801 Receptor kinase-like Gene Family AT4G23190 51.323 3.78e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02373 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02373 - - gmx:100803275 1270.76