Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02369 ATGGCGAGACAAGATGAGGGATGGGCAGTAGGAATCGACCTTGGCACGACTTACTCATGTGTTGCAGTATGGCAAGAACAACATTGTCGAGTGGAGATCATCCACAACGACCAAGGCAACAGAACCACTCCTTCTTGTGTTGCTTTCACTGATAACCAAAGATTAATTGGCGATGCTGCTAAGAATCAGGCTGCTATCAACCCAACCAACACTGTCTTTGGTAATAAATTGTTATTTTTTAGTTCATAG 249 0.4337 MARQDEGWAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTDNQRLIGDAAKNQAAINPTNTVFGNKLLFFSS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02369 82 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops7g02369 82 PANTHER HEAT SHOCK PROTEIN 70KDA 9 78 IPR013126 GO:0005524|GO:0140662
Rops7g02369 82 Gene3D - 1 80 - -
Rops7g02369 82 SUPERFAMILY Actin-like ATPase domain 9 79 IPR043129 -
Rops7g02369 82 FunFam heat shock 70 kDa protein-like 3 80 - -
Rops7g02369 82 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops7g02369 82 PRINTS 70kDa heat shock protein signature 60 68 - -
Rops7g02369 82 PRINTS 70kDa heat shock protein signature 38 50 - -
Rops7g02369 82 Pfam Hsp70 protein 9 77 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02369 Rops-Chr7 42484941 42485189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02369 1 78 Calmodulin-binding Proteins AT3G12580 76.923 2.49e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02369 K03283 - gmx:102667572 136.732