Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02368 ATGTTGTCCGCTTCAGCATCTATGGAAAAGAGAAAAGTTTCTGAATTGCTGTCAGAGCTGATGGTTTTGGCTGATGAGGTTGCTTCTTTTGCTAAGAACTCCGAAATTGAGGTAGATGTTTTTGCTGAGTTTGCCATGTTGGTTGGGAAATTGCCGCCAATCTTGAATGACTTGAGGGACAAAAGCACAGTCTTGGACAAGCCACCAATTCGAAGATCATTGGAATCTCTTGAGAATGAGCTAAGGCGTGCTAAAGCTTTAACAAAAAGCTCCAATTTGAGACAACCCTTTAAACAAATTGAGGACATAACACATGATATTGGTCGATCATTGGGACTTCTGCTTGTAGCCAGCCTTGAAGTGTCCACAGATTTTAGAGAAAAGGTTGGTTCATTACAAAGACAGTTGATGAATGCAAGATTTGATGGCAATTCAAGTCTAACTTCAAGTCCAAAATCAGAGCATTTCAGTAGTGACATGAAGGTGAACGGGGAAATAGAAGAGGAAATAGTTAATGTTTCTATAGACGATGTTGTTTTGCAACTTAAGAATGGTAATGATGAAGAATTTGCAGTTTCACTTTTGAGACTAAAGGAGTTCATGAGGAGTGAAAAACTGGATGGTGGTTTGATTAATGAGGAAGCAACTATTGCCATTCTTTTCAATCGTCTAGGTTCGTGTAAGGCAGACAACAGGCTGGCCATCATTCAATTGCTAAGAAGTATTGCCTTTGGAAATGATGAGAAAAAGGAGAAGATGGCAGATATTGAGTTTTTATCAGCAGTGGTGAAGTCTCTGACAAGAGATTCAAAAGAGAGAAGGGAAGCAGTGGGGCTGTTGCTGGAGCTCTCTAATCTTCCTGCAGTTCGAAGGCGGATTGGAAGAATCCAAGGTTGCATTGTTATGTTAGTTGCTATCCTTAATGGGGATGACCCTGTTGCTTCACATGATGCAGCAAAGTTATTGGATATGTTGTCTACTAATACTCAAAATGCACTTCATATGGCCGAGGCTGGCTACTTTAGGCCATTAGTGCAGTATTTGAAGGAAGGGTCTGACATGAGCAAGATCCTAATGGCAACAGCACTTTCTAGGTTGGAACTCACTGATCACAGCAAACTTGCCCTTGGAGAAGATGGTGCAATTGAACCCCTAGTTAAAATGTTTAATACTGGGAAACTTGAGTCCAAGTTATCATCACTAAATGCACTACAAAATCTTTCTAGCTTGACAGAAAATGTGCAACGTATGATCAGATCAGGAATTACAGGATCTCTTCTACAACTTCTTTTCTCTGTAACATCTGTGCTCATGACTCTGAGGGAGCCTGCATCAGCTATTCTTGCAAGAATTGCTCAGTCAGAATCCGTTCTTGTTAATGAAGATGTGGCTCAACAGATGCTTTCACTTTTGAATCTTTCCAGTCCTGTAATTCAAGGTAACCTATTAGAAGCTCTAAATAGCATGGCTGCCCATCCTGGCGCATCCAAAGTAAGAAGAAAAATGAAGGAAAAAGGTGCACTTCAGCTACTCTTACCTTTTCTAAAGGAAAATAACATCAAAATCAGGTGTAAGGTCTTGCATTTGCTATACTCACTCTCTAAAGATATAACAGATGAGTTGACTGAATATCTTGAGGAAACTCATCTTTTCAACTTTGTAAATATTATCTCATCATCAACATCAGAGAGTGAAAAAGCTGCTGCTGTTGGCATACTAAGTAATCTTCCTGCTAGTGATAAAAAGGTGACAGATATACTGAAGAGGGCAAATTTGCTGCCTATTTTGATATCCATTGTGTATTCTAGCACAGGAAGCAATTCACACACGACAAATAGCTTAGCAGAGAATGTTGCAGGTGTCATAATCCGCTTCACAAATTCCTCTGACAAGAAACTACAACTTCTTTCAGCAGAACATGGGGTGATTCCTTTACTTGTAAAACTGCTCTCAAGCAGTTCACTAATCACAAAATCAAGGGCTGCAAACTCTCTGGCTCAACTATCACAGAATTCTTTATCTCTTAGGAAGTCTAGAAAGTCAAGGTGGTTATGTGTTCCACCCTCAGTGAATGCATATTGTGAAGTTCATGATGGCTACTGCTTTGTCAACAGCACATTTTGTTTGGTCAAGGCAGGTGCTGTTTCTCCACTAATACAAATGTTGGAAGATAAGGAGAGAGAAGTAGTTGAAGCTGCTTTAGGTGCTCTTTCAACTCTTTTGCAAGAAGAAATCTGGGAAGGTGGTGTCAATTTCATTGCCAAATTATCCGGTGTGCAGCCTATTATAAAAAGTCTAGAAGTTGGGGATGCAAAGGTTCAAGAAAAAGCACTATGGATGTTGGAGAGAATATTCAGGATTCAAGAACATAGAGTAAAATATGGAGAATCTGCTCAGGTGGTTCTTATTGATTTGGCCCAGAAGAGTGATTCTAGAGTGAAGTCAACAGTTGCAAAAGTATTAGCTGAGCTGGAGCTCTTGCAAGCTCAATCAAGTTACTTTTGA 2505 0.3988 MLSASASMEKRKVSELLSELMVLADEVASFAKNSEIEVDVFAEFAMLVGKLPPILNDLRDKSTVLDKPPIRRSLESLENELRRAKALTKSSNLRQPFKQIEDITHDIGRSLGLLLVASLEVSTDFREKVGSLQRQLMNARFDGNSSLTSSPKSEHFSSDMKVNGEIEEEIVNVSIDDVVLQLKNGNDEEFAVSLLRLKEFMRSEKLDGGLINEEATIAILFNRLGSCKADNRLAIIQLLRSIAFGNDEKKEKMADIEFLSAVVKSLTRDSKERREAVGLLLELSNLPAVRRRIGRIQGCIVMLVAILNGDDPVASHDAAKLLDMLSTNTQNALHMAEAGYFRPLVQYLKEGSDMSKILMATALSRLELTDHSKLALGEDGAIEPLVKMFNTGKLESKLSSLNALQNLSSLTENVQRMIRSGITGSLLQLLFSVTSVLMTLREPASAILARIAQSESVLVNEDVAQQMLSLLNLSSPVIQGNLLEALNSMAAHPGASKVRRKMKEKGALQLLLPFLKENNIKIRCKVLHLLYSLSKDITDELTEYLEETHLFNFVNIISSSTSESEKAAAVGILSNLPASDKKVTDILKRANLLPILISIVYSSTGSNSHTTNSLAENVAGVIIRFTNSSDKKLQLLSAEHGVIPLLVKLLSSSSLITKSRAANSLAQLSQNSLSLRKSRKSRWLCVPPSVNAYCEVHDGYCFVNSTFCLVKAGAVSPLIQMLEDKEREVVEAALGALSTLLQEEIWEGGVNFIAKLSGVQPIIKSLEVGDAKVQEKALWMLERIFRIQEHRVKYGESAQVVLIDLAQKSDSRVKSTVAKVLAELELLQAQSSYF* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02368 834 Gene3D - 209 316 IPR011989 -
Rops7g02368 834 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 380 422 IPR000225 GO:0005515
Rops7g02368 834 Gene3D - 692 830 IPR011989 -
Rops7g02368 834 SUPERFAMILY ARM repeat 360 789 IPR016024 -
Rops7g02368 834 SUPERFAMILY ARM repeat 175 432 IPR016024 -
Rops7g02368 834 Coils Coil 74 94 - -
Rops7g02368 834 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 179 834 - -
Rops7g02368 834 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 713 740 IPR000225 GO:0005515
Rops7g02368 834 Pfam Armadillo/beta-catenin-like repeat 708 740 IPR000225 GO:0005515
Rops7g02368 834 Gene3D - 318 681 IPR011989 -
Rops7g02368 834 SMART arm_5 746 786 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 328 368 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 246 285 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 495 535 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 702 742 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 369 409 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 410 453 IPR000225 GO:0005515
Rops7g02368 834 SMART arm_5 630 670 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02368 Rops-Chr7 42448478 42452705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02368 217 834 U-box Gene Family AT1G76390 29.955 1.27e-51 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02368 K08332 - gmx:100791453 1294.64