Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02346 ATGCTCAAAAGGTTACGAGTATTATCATTATCAAAGTATACAAACATCACTATGCTACCAGATTCAATTGGCAGTTTGGTGCAGTTGCGCTATCTAGATGTCTCCAACACTAAAATCAAAAGCTTGCCCGGGACAACATGTAACCTTCACAATTTGCAAACCTTGAATTTATCACATTGTGGGGGTCTCACTGAATTGCCAGTACATATTGAAAAGTTAGTTAACTTACGCCACCTTGATATTAGTGGGACGAACATAACGGAGATGCCAGTGCAAATTGCTGGACTAGAAAACCTTCGAACTTTAACTGTATTTGTAGTGGGCAAGCAACAAGTGGGGTTAAGTATCAAAGAGCTTAGGAAGTTTCCACACCTGCGGGGAAAACTTTCCATCAAGAACCTTCATAATGTCATTGATGCCAAAGAGGCATATGATGCCAACTCGAAGAGCAAAGAACAAATTGAGGAACTAGTGCTAGAATGGGGCACTGAAACTGAAGACTCGCGAACAGAGAAAGATGTGCTTGATATGTTGCGACCATCAATAGACCTAAAGAATTTGACCATCAACTTCTATGGCGGTACCAGCTTTCCAAGGTGGTTGGGAGAGTCTTCATTTTCTAACATGGTGTACCTTCACATCAATAATTGTGAATATTGTGTAACACTCCCACCATTAGGGCAGCTACCTTCTCTCAAGGTCCTAAGTGTTTGTGGTTTGACATTAGAGACAATTGGCCCAGAGTTCTATGGCTCTTCATTGCAACCATTTCCATCCTTGGAAAGTTTGGAATTTTCAAGCATGTCAAATTGGAAGGAATGGCTAGCCATTGAAAGCGACGAATTTCCTTTTCCTCGTCTTGAAACTCTGGAGGAAGGGAAGGAAGCATTGCATTCCCGTTTCAGGGATGTCAATGGAAAGGCTTGCACAGTGCATACAATTCAGCTTCTCATTTTTCTTGAAGAAGAAGCAGCAGCAGCAGCAGCAGATTGA 993 0.4189 MLKRLRVLSLSKYTNITMLPDSIGSLVQLRYLDVSNTKIKSLPGTTCNLHNLQTLNLSHCGGLTELPVHIEKLVNLRHLDISGTNITEMPVQIAGLENLRTLTVFVVGKQQVGLSIKELRKFPHLRGKLSIKNLHNVIDAKEAYDANSKSKEQIEELVLEWGTETEDSRTEKDVLDMLRPSIDLKNLTINFYGGTSFPRWLGESSFSNMVYLHINNCEYCVTLPPLGQLPSLKVLSVCGLTLETIGPEFYGSSLQPFPSLESLEFSSMSNWKEWLAIESDEFPFPRLETLEEGKEALHSRFRDVNGKACTVHTIQLLIFLEEEAAAAAAD* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02346 330 Gene3D Ribonuclease Inhibitor 1 305 IPR032675 -
Rops7g02346 330 Coils Coil 140 160 - -
Rops7g02346 330 SMART LRR_typ_2 26 49 IPR003591 -
Rops7g02346 330 SMART LRR_typ_2 73 96 IPR003591 -
Rops7g02346 330 Pfam Leucine rich repeat 4 60 IPR001611 GO:0005515
Rops7g02346 330 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 275 - -
Rops7g02346 330 SUPERFAMILY L domain-like 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02346 Rops-Chr7 42089552 42094648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02346 14 102 WRKY Transcription Factor Family AT4G12020 41.111 1.12e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02346 - - mtr:11415408 391.734