Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02343 ATGGATTGGCATGACACTTCCAAGAAGTTTGAGATTTGTTACAAATTCAAGCGCTTAAGGACCTTCCTACCCTGTGACCCATATGGAATGTTCAGAAATTTGTCTAGAAAGGTGGTGGATGATTTGCTACCCACGCTGAAAAGGTTGCGAGTATTATCATTATCAATGTATACAAACATCAGTATGCTACCAGATTCAGTTGGCAGTTTGGTGCAATTGCGGTATCTAGATCTCTCCAATACTGGAATCAAAAGCTTGCCTGGCACAACATGTAACCTTTACAATTTGCAAACCTTGAATTTATCAGACTGTCGAGATCTCACTGAATTGCCAGTACATATTGAAAAGTTAGTTAACTTACGCCACCTTGATATTAGTGGGACGAACATAACGGAGATGCCAGTGCAAATTGCTGGACTAGAAAACCTTCGAACTTTAACTGTTTTTGTAGTGGGCAAGCAACAAGTTGGGTTAAGTATCAAAGAGCTTAGGAAGTTTCCACACCTGCGGGGAAAACTTTCCATCAAGAACCTTCATCATGTCATCGATGCCAAGGACGCATACGATGCCAACTTGAAGAGCAAAGAACAAATTGAGGAACTAGTGCTAGAATGGGGCACTGAAACTGAAGACTCGCGAACAGAGAAAGTTGTGCTTGATATGTTGCGACCATCAATAGACCTAAAGAAATTGACCATCAACTTCTATGGCGGTACCATCTTTCCAAGGTGGTTGGGAGAGTCTTCATTTTCTAACATGGTGTACCTTGACATCAATAATTGTAAATATTGTGTAACACTCCCACCATTAGGGCAGCTACCTTCTCTCAAGGTCCTAAGAGTTAGTGGTTTGACATTAGAGACAATTGGCCCAGAGTTCTATGGCTCTTCATTGCAACCATTTCCATCCTTGGAAAGTTTGGAATTTTCAAGCATGTCAAATTGGAAGGAATGGCTAGCCATTGAAAGCGACGAATTTCCTTTTCCTCGTCTTGAAACTCTGGAGTTACATCAATGGAAGGGAAGGAAGAATTGCACTCCCATTTCAGGGATGTCGATGGAAAGGCTTGCACAGTTTATACAATTCAGCTTCTCATTTTTCTTCAAGAAGAAGAAGAAGCAGCAGCAGATTGATTGA 1137 0.4125 MDWHDTSKKFEICYKFKRLRTFLPCDPYGMFRNLSRKVVDDLLPTLKRLRVLSLSMYTNISMLPDSVGSLVQLRYLDLSNTGIKSLPGTTCNLYNLQTLNLSDCRDLTELPVHIEKLVNLRHLDISGTNITEMPVQIAGLENLRTLTVFVVGKQQVGLSIKELRKFPHLRGKLSIKNLHHVIDAKDAYDANLKSKEQIEELVLEWGTETEDSRTEKVVLDMLRPSIDLKKLTINFYGGTIFPRWLGESSFSNMVYLDINNCKYCVTLPPLGQLPSLKVLRVSGLTLETIGPEFYGSSLQPFPSLESLEFSSMSNWKEWLAIESDEFPFPRLETLELHQWKGRKNCTPISGMSMERLAQFIQFSFSFFFKKKKKQQQID* 379
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02343 378 SMART LRR_typ_2 70 93 IPR003591 -
Rops7g02343 378 SMART LRR_typ_2 273 295 IPR003591 -
Rops7g02343 378 SMART LRR_typ_2 117 140 IPR003591 -
Rops7g02343 378 SUPERFAMILY L domain-like 31 339 - -
Rops7g02343 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 11 335 - -
Rops7g02343 378 ProSiteProfiles Leucine-rich repeat profile. 72 93 IPR001611 GO:0005515
Rops7g02343 378 Gene3D Ribonuclease Inhibitor 15 364 IPR032675 -
Rops7g02343 378 Pfam Leucine rich repeat 95 147 IPR001611 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops7g02343 Rops-Chr7 41939725 41943622 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02343 58 146 WRKY Transcription Factor Family AT4G12020 41.111 6.93e-09 55.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02343 - - mtr:11408421 434.491