Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02332 ATGCAAGGAGCGGATGATTACTCTGGAGAAGAAAAGAGGTTCAGTGCTTCTCTACTAGGGATTTCACTCGCCGCACCAGCAGCAGGAGGAGGAGAAGGATGTCTCGCAGGAAGTTCGAACACCCCAGGCGCGGGTCTTTGGGAGCGTGCTGCTCGTCACAGGGGGAAAGTGAAGGCATCCCCTAAGGATGATCCATCCAAGTCACCCAAGCTTACTGCCTTCTTGGGTTACAAGGCTGGTACGACTCACATTGTCAGAGAGTTCGAGAAACCAGGATCAAAGCTTCACAAGAAGAAGACCTGCGAGCCAGTTGCTATTATTGAGACCCCTCCAATGGTTATTGTCGGTGTTGTGGGTTATATTAAACTCCTCGTGGTCTTCGAACATTGA 390 0.5077 MQGADDYSGEEKRFSASLLGISLAAPAAGGGEGCLAGSSNTPGAGLWERAARHRGKVKASPKDDPSKSPKLTAFLGYKAGTTHIVREFEKPGSKLHKKKTCEPVAIIETPPMVIVGVVGYIKLLVVFEH* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02332 129 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 47 122 IPR045077 GO:0003735|GO:0005840|GO:0006412
Rops7g02332 129 MobiDBLite consensus disorder prediction 51 65 - -
Rops7g02332 129 SUPERFAMILY Translation proteins 48 121 IPR009000 -
Rops7g02332 129 MobiDBLite consensus disorder prediction 51 70 - -
Rops7g02332 129 Gene3D Translation factors 72 126 - -
Rops7g02332 129 Pfam Ribosomal protein L3 43 123 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02332 Rops-Chr7 41606863 41607252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02332 48 112 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 78.462 4.10e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02332 K02925 K10999 gmx:100806786 141.739