Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02330 ATGGCTTCTGCTCCACTCTGTCTTTTGGTTCATGCCTTCCTTGTTGAAACTGAAACAGGTTGTGATGCATCTGTGTTGCTAGATAGCAGTGGAACCATCATCAGTGAGAAGAGGTCAAATCCAAACCGTGATTCAGCTCGAGGATTTGAAGTCATTGAAGAAATTAAATCCGCACTAGAGAAAGAATGCCCTCGTACAGTGTCTTGTGCTGACATTTTGGCTCTAGCTGCAAGAGATTCAACTGTTCTTGTGGACCAAGTCGGTAGTACCTTTAGGCAGAAGGGACTCACTAGGTGCAAGCCTCAGTGGCTCAAATAA 318 0.4497 MASAPLCLLVHAFLVETETGCDASVLLDSSGTIISEKRSNPNRDSARGFEVIEEIKSALEKECPRTVSCADILALAARDSTVLVDQVGSTFRQKGLTRCKPQWLK* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02330 105 Pfam Peroxidase 12 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 Gene3D - 1 101 - -
Rops7g02330 105 SUPERFAMILY Heme-dependent peroxidases 8 86 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 PRINTS Plant peroxidase signature 47 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 PRINTS Plant peroxidase signature 7 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 PRINTS Plant peroxidase signature 66 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 ProSiteProfiles Plant heme peroxidase family profile. 20 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops7g02330 105 PANTHER PEROXIDASE 72-RELATED 6 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02330 Rops-Chr7 41595533 41596303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02330 20 83 Peroxidase AT5G66390 89.062 5.66e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02330 K00430 - pvy:116112108 125.176