Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02313 ATGCAACAGGATGAACGAACAGCAGATGATGCAGCAGCTGTCATTTGGCAAGACAATATTGATCACGACAACATGTTCTATGAGGAACTACTTGACTTAGGTGAGGCTGTTGGAACTCAAAGTCGTGGTCTCACCCAAGAACAGATCTCCTTGCTTCCAGCTTCAAAGTACAAGTGTGGGTTCTTCATCAGGAAGAAGTCACGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGTGCCACCACCATTGTCGGGGTCGGTGGGAGTTTGGGGTAGCATTTGTAGGGTCAAGTTCTTGCTATCATTGGAGATGGTCCCACAAAGACCAGATCACCGGCAACAAAAACCATGTTGATGGTGTGCAAACCTACTCCACAACAACCTTCAGTGCAAATGCTCCTAACTTCATGGCCAAGGATGTTGGGTTTGAGAACACAGTAGGAGCTGAGAAGCACCAAGCCGTTGTACTTAGGAAGATATCATGGCAACCTGAAAATCCTCCTGTTACTGTACCACCTAAGCAGCACCTCCACCACGCATTATCTTCTCCATGGCTGCCACCATAA 576 0.4705 MQQDERTADDAAAVIWQDNIDHDNMFYEELLDLGEAVGTQSRGLTQEQISLLPASKYKCGFFIRKKSRDERCVICQMEYKRGCHHHCRGRWEFGVAFVGSSSCYHWRWSHKDQITGNKNHVDGVQTYSTTTFSANAPNFMAKDVGFENTVGAEKHQAVVLRKISWQPENPPVTVPPKQHLHHALSSPWLPP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02313 191 Gene3D - 92 165 IPR012334 -
Rops7g02313 191 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 82 IPR033276 GO:0004842|GO:0016567|GO:0046621
Rops7g02313 191 Pfam Pectinesterase 110 162 IPR000070 GO:0030599|GO:0042545
Rops7g02313 191 SUPERFAMILY Pectin lyase-like 111 161 IPR011050 -
Rops7g02313 191 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02313 Rops-Chr7 41042060 41042944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02313 10 82 C3H Transcription Factor Family AT3G63530 60.274 1.90e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02313 K19045 - gmx:100805963 134.42