Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02305 ATGTTAGGCCTTAGAGACCTAGTTTTCATATCTCCAACCCCTTCTTCCATGCATCATCAACAACAACAACACCACCAAGGCCAACCCATTTCAGCAGAACACAATTCCAACCTTCCTCTTCCTTCATCAGCTTCTCTCAGTGTTGGTTTTGGCATTTTTCCACTCCTAACTGCCACTCCTTGTGTGCCTCAGCCTCAGAACAATGAGGTTCAAGAGTGTGGTAACAACAACAACAACAACAACTATTGGAACCTTAAGATGTGCCCAGAAGTGAATCCTTCAAAGAAAGGAGTTATCAACATGGAAGATGATGATGAGAGTCACAACAAGGTTATGATGGAGAGTGAGGAAAATGGTGTTTATGGTGCTGACTTTAGAGTGTGTCAAGATTGTGGTAACAGGGCAAAGAAAGATTGTCTCTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGATTTGATTGCAGCACTCACTTGAAGAGCACGTGGGTTCCCTCAATTCGCCGCCGGGAGCGTGAGATGGCGGCGGTTTCCGGTGGTGATGGTGGTTCTTCGGGAATTAAGAGGCCAAGACCTTTAGTGGGGTCATCACAAAATGCCACTGCCACATCTCATAGTTCCAACTCTAATGCTACCACACCAAAGAGCTTAGCTATTAGTTCTTGTCACCAAGATGCTGGCTTCAAAGAGTCTTTACCAGGTCATGTTCGTGCACCTGCTGTATTTAGGTGCCATAGAGTCACTGCTATTGGTGATGGTGAAGATGAATTTGCATATTTGGCCACGGTTCATATTAGTGGCCATGTGTTCAAGGGGTTTCTTTATGATCATGGTGTTGGTGGGAAAAATGCAATGCCTTGTGTTTCAGAACTGCAACTGGGAAACAATTGTGGTGGAAAGAATGGGGAATGTTCTTCTGCAATTGGGGTTCCAACCAATAATGCCTACCCTGCTTCTGCTAGCTGA 966 0.4524 MLGLRDLVFISPTPSSMHHQQQQHHQGQPISAEHNSNLPLPSSASLSVGFGIFPLLTATPCVPQPQNNEVQECGNNNNNNNYWNLKMCPEVNPSKKGVINMEDDDESHNKVMMESEENGVYGADFRVCQDCGNRAKKDCLFRRCRTCCKGRGFDCSTHLKSTWVPSIRRREREMAAVSGGDGGSSGIKRPRPLVGSSQNATATSHSSNSNATTPKSLAISSCHQDAGFKESLPGHVRAPAVFRCHRVTAIGDGEDEFAYLATVHISGHVFKGFLYDHGVGGKNAMPCVSELQLGNNCGGKNGECSSAIGVPTNNAYPASAS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02305 321 MobiDBLite consensus disorder prediction 191 213 - -
Rops7g02305 321 MobiDBLite consensus disorder prediction 14 38 - -
Rops7g02305 321 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 307 IPR007818 GO:0003700|GO:0006355
Rops7g02305 321 NCBIfam LRP1 C-terminal domain 232 279 IPR006511 -
Rops7g02305 321 Pfam Domain of unknown function (DUF702) 127 279 - -
Rops7g02305 321 MobiDBLite consensus disorder prediction 174 213 - -
Rops7g02305 321 NCBIfam putative zinc finger domain, LRP1 type 127 169 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02305 Rops-Chr7 40887217 40891306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02305 1 316 C2H2 Transcription Factor Family AT5G12330 42.025 3.86e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Rops7g02305 DUF702 9.2e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02305 - - gmx:100806835 453.751