Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02302 ATGAGGTACCCTTGTGACTTGGCTTTGGAGATATTCACAATTGTTGCTCATGAAGCACTACAACTGCTATCCCAGAATGCTTCGTCTACTCTCTCAAACCACTCCATGGAACGTAAATCTTTTAGCTTTCTTGATTCAAAGAATGAACCTGTACTTTGTTGGGGATCTAAGAAGAGAAGCCGGAAAAGAAAAGCCAAGAAAGAAGGAACTAACCCATCAAAGAAACACAAGACTAACAACGTCAATAAAATTCTTGGCCAACCGGAATTGCCAAGGGAATTCAAAGAAAAGATTCAAGATTTGGAGGGTTATGATATCCCTCAAGAAGCAAAGAATTTTCTGACACAAACAGAAAAGTCCTCAATGAATAAGCGTCATGGGAAGAACAAAAGCATTGCTGGTTTGCCAGTGTTTGTGTTGGATCCTAATCTTGAACACCACAACATGCGCTTGAAGAAGTGGAAAATGGAGACAACCTTTGTGTACAATATAACCACGGGATGGAATGAAGTTGTGTGCAATAATCATCTGAAAGCCAAAGATACAGTGCAATTGTGGTCTTTTAGAAGCTACAACCAGCTGTGTTTTGCAATGGTTAAGCTTTAA 606 0.396 MRYPCDLALEIFTIVAHEALQLLSQNASSTLSNHSMERKSFSFLDSKNEPVLCWGSKKRSRKRKAKKEGTNPSKKHKTNNVNKILGQPELPREFKEKIQDLEGYDIPQEAKNFLTQTEKSSMNKRHGKNKSIAGLPVFVLDPNLEHHNMRLKKWKMETTFVYNITTGWNEVVCNNHLKAKDTVQLWSFRSYNQLCFAMVKL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02302 201 Pfam B3 domain-containing protein At2g31720-like 111 172 IPR005508 GO:0003677
Rops7g02302 201 MobiDBLite consensus disorder prediction 57 71 - -
Rops7g02302 201 CDD B3_DNA 124 196 IPR003340 GO:0003677
Rops7g02302 201 SUPERFAMILY DNA-binding pseudobarrel domain 130 197 IPR015300 -
Rops7g02302 201 Gene3D - 94 201 IPR015300 -
Rops7g02302 201 MobiDBLite consensus disorder prediction 55 79 - -
Rops7g02302 201 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 106 201 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02302 Rops-Chr7 40771188 40771430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02302 110 198 B3 DNA Binding Superfamily AT1G05930 33.708 3.55e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02302 - - gmx:102667627 133.65