Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02294 ATGGAGGCAAGGATCGGGAGAAAGAGAGAGTATGCCATTGCAGCTTTTAAAGCTGGAAACAAAGATGTGTTGGTTGCAACCGATGTTGCATCCAAAGGTTTGGATTTTCTCGATATTCAACATGTCATTAACTATGACATGCCACCGAAATTGAAAATTATGTCCATAGGATTGACTGATTTGGAAGATGTGGCAAGACCGATAGATGTAAAAGGGGCTGCAGTTTGGCTCTTTGGCTTTGATGAAGCCGTGCCTTAG 258 0.4264 MEARIGRKREYAIAAFKAGNKDVLVATDVASKGLDFLDIQHVINYDMPPKLKIMSIGLTDLEDVARPIDVKGAAVWLFGFDEAVP* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02294 85 Gene3D - 5 64 IPR027417 -
Rops7g02294 85 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 59 - -
Rops7g02294 85 Pfam Helicase conserved C-terminal domain 8 51 IPR001650 -
Rops7g02294 85 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 51 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02294 Rops-Chr7 40594996 40596035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02294 2 48 Eukaryotic Initiation Factors Gene Family AT5G11170 44.681 6.88e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02294 K13116 - gmx:100819984 79.3369