Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02293 ATGATTGGGATTGCTTTCACAGGCTCTGGAAAAACTCTGGTCTTTGTGCTGCCCATGATCATGGTGGCAATGCAGGAGGAAATTATGATGCCTATAGTTCCTGGAGAAGGACCATTTGGTTTGATTATTTGTCCATCAACGGAACTGGCTAGGCAAACTTATGATGTGGTTGAACAATTCCTGATACCTTTGAAGGAAGCTGGATATCCAGAGTTGAGGCCTCTGCTTTGTATTGGTGGAGTGGACATGAGATCGCAGCTTGAGATTGTGAAGAAGGGAGTTCATATTGTTGTTGCCACTCCTGGGAGGTTGAAGGATATGTTGGCCAAGAAGAACATGAATCTTGATTCTTGTAGGTATTTAAAATTAGATGAGGCTGATCGATTGGTAGATTTGGGATTTGAAGATGATATAAGAGAAGTTTTTGATCACTTCTAA 438 0.4155 MIGIAFTGSGKTLVFVLPMIMVAMQEEIMMPIVPGEGPFGLIICPSTELARQTYDVVEQFLIPLKEAGYPELRPLLCIGGVDMRSQLEIVKKGVHIVVATPGRLKDMLAKKNMNLDSCRYLKLDEADRLVDLGFEDDIREVFDHF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02293 145 PANTHER RNA HELICASE 1 143 - -
Rops7g02293 145 SMART ultradead3 1 145 IPR014001 -
Rops7g02293 145 Gene3D - 1 145 IPR027417 -
Rops7g02293 145 Pfam DEAD/DEAH box helicase 2 144 IPR011545 GO:0003676|GO:0005524
Rops7g02293 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 144 IPR027417 -
Rops7g02293 145 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 145 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02293 Rops-Chr7 40594268 40594705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02293 1 142 Eukaryotic Initiation Factors Gene Family AT1G72730 30.282 1.18e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02293 K13116 - gmx:100814127 279.256