Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02289 ATGGAGGACAAAGCAGAGAACCAAGATCATAACCACCCATCTCTCCTCCCTAATCATAACACCATCACAACCAAGGAAGAGTCACCAAGAAAACCAATTGGTGGTGGTGGTGGTGGTGGTGGCAGTGATAGGCTTAAGAGAGATGAGTGGAGTGAAGGAGCTGTTTCTACCCTTCTTGAAGCCTATGAAGCCAAGTGGGTACTTAGAAACAGAGCCAAACTCAAAGGTCATGATTGGGAAGATGTTGCAAAATATGTTTCATCAAGAGCAAACTCCACCAAATCACCAAAGACACAAACACAGTGCAAAAACAAGATTGAGTCTATGAAGAAAAGGTATAGATCAGAGTCAGCAACTGCAGATGCATCATCTTGGCCTTTATATTCTCGTCTTGATCTTCTTCTAAGAGGGACAGGACCAATATCAACACTTTCACCACAAACAGCAACAACAACAATTGCAGCAACTTCTCAATCACCACATCCTAGTAATAACCAAGCCTTGATGTTGTTAGAGCCATCACTTGCAGTGTCACAAGCACCCCATCAGCCACCTCTTCTTGTTCCTCCACCACCACTTGCAACTGCACAAAACTCACATGGATCCAATGGTGTTGAAAGATTGGCCAAGGAAGAAGGGTTAGGAACTAAGTCATCTGATCATGTATCTAACAAGAATCCATTAGACACTGATAGCAGTACACCAGCACTTTACAGTGAAAAGGACAAACTAAGATGCAACAAGAGGAAGATGAGAACTGAGAACAACAAGAGGAGAAGGAAAGAAGATATGGAAATAGCAGAAAGCATAAGGTGGCTAGCAGAGGTGGTGGTAAGGTCAGAACAAACAAGAATGGACACATTGAAAGAGATAGAGAGGATGAGAGTTGAAGCTGAGGCAAAGAGAGGGGAAATGGATCTCAAGAGAACTGAAATCATTGCCAATACTCAACTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCTTCATTAAGAATTGGAAGAAGTTAA 1023 0.4223 MEDKAENQDHNHPSLLPNHNTITTKEESPRKPIGGGGGGGGSDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVAKYVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPISTLSPQTATTTIAATSQSPHPSNNQALMLLEPSLAVSQAPHQPPLLVPPPPLATAQNSHGSNGVERLAKEEGLGTKSSDHVSNKNPLDTDSSTPALYSEKDKLRCNKRKMRTENNKRRRKEDMEIAESIRWLAEVVVRSEQTRMDTLKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02289 340 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 24 326 IPR044823 -
Rops7g02289 340 FunFam Trihelix transcription factor ASIL2 50 115 - -
Rops7g02289 340 Gene3D - 50 115 - -
Rops7g02289 340 MobiDBLite consensus disorder prediction 1 48 - -
Rops7g02289 340 MobiDBLite consensus disorder prediction 219 235 - -
Rops7g02289 340 MobiDBLite consensus disorder prediction 180 236 - -
Rops7g02289 340 MobiDBLite consensus disorder prediction 142 165 - -
Rops7g02289 340 Pfam Myb/SANT-like DNA-binding domain 47 133 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02289 Rops-Chr7 40481639 40484085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02289 14 323 Trihelix Transcription Factor Family AT3G14180 24.518 8.97e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops7g02289 Myb_DNA-bind_4 4.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02289 - - gmx:100799917 483.796