Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02280 ATGTCATTTGTCGGAGAAGCATTCCTCTCAGCTTCAGTGGAAGTGTTGTTAGAGAGAATCATTTCCCATGAGTTCCTATACTTCTTCAGAAGCAAGGAGCTTGATGTTTCACTCCTGAAGAAGCTGAAAATAACACTGTTGAGTCTTCAAGCTGTTCTGAATGATGCTGAGGAGAAACAAATCACCAATCCTGCTGTCAAGGAATGGTTAGATGAGCTAAGAGATGCTCTCTATGATGCTGATGATTTGTTGGATGAAATCAACACTGAGGCTTTGAGATGCAAAGTGGAAGAAGCTGTGTTCCAAAGTAAAAGTCAACAACCCATTAGTGATCAGGTGCTGAATTTCCTTTCTTCTCCTTTCAAAAGGTTTTCTGGGGTCTTAAATTCTGAAATACAAGCTCTTTTACAAAGGTTAGAGCAATTTTCAGTGCAAAAAGACATCCTTGGACTGAAAGAAGGTGTTTCAGGAAGAGTTTGGCATGGAACACCTACTAGTTCTGTGGTAGATGAATCTGCTATTTATGGCAGAGATGATGACAAAAAGATACTTAAGGGTTATTTGATGTCAGAAGATGATAGTGGTAGTGGAAGTAAAATAGGGGTGATTACCATTGTGGGTATGGGTGGACTTGGTAAAACAACCCTTGCTAAACTTCTTTACAATGATCATGAAGTGAAAAGGAAATTCGATCTGAAAGCATGGGCTTATATTTCAAAGGATTTTGATGTTTGTAGTGTGACTAAAAGCCTTCTTGAATCTGTTAGTTCAAAGCCAGTTGTCACAAATAACCTGAATACTCTCCAAGTGGAATTGCAACAAAGCTTAAGCAACAAGAGATTTTTGCTTGTTTTGGATGACATATGGGATGGAAGCTATGATGACTGGAACAACCTGAAGGCCATTTTTAAAGCTGGGGAAATGGGAAGTAAGATCATCATCACAACTAGGGATGAAAGTGTAGCATTAGCAATGCAGACTTATCTTCCTATTCACTATCTGAGATCTCTTCGTAGTGAAGATTGCTGGTCTTTACTTGCCCATCATGCTTTTGGACCAAATAACTGCAAGCAACAATCCAAACTAGAAGTAATTGGCAAAGAAATTGCAAAAAGATGTGGTGGATTACCATTAGCTGCAGAAGCACTTGGGGGTCTTCTTCGCACCAAGTTATTGGAAAAGGAATGGAATAAGGTGTTAAAAAGTAACATATGGGATTTGCCAAATGTTAAGGTGCTACCAGCTCTGCTGTTGAGCTATCATTATCTTCCTTCTCCTTTAAAACGATGCTTTGCTTATTGTTCAATTTTTCCAAAGAACTCCAGTTTAGATAAGAAGATGGTGGTTCTTCTATGGATTGCAGAAGGTTTAGTACATCAGTCCAAATGTGGCAAAACTATGGAAGAGGTAGGTGATGAATACTTCGATGAACTAGTATCACGGTCACTAATTCGTCGACAGAATGTTAATGAGAAAGAAAACTTCATGATGCATGACCTCATCAATGAGTTAGCTACCATTGTTTCATCTGCATATTGCGTCAGGCATGAGGACTCAAAGCCACATGAAAGTCTTGAAAAAGTTCGTCATTTGTCATACAACAGAGGGAGGTACGATTGCTTCAATAAGTTTCATACATTTTATGGATCAAAATGTCTTCATACCTTTCTTGCATTACCATTAAGACATTGGTGGTCATCAAAATATCCTAATTTGAGAAGCCATTACCTATCAAGCAAGTTACTATTTGACTTGTTGCCAGCAATGAGACGGTTGAGGGTGTTATCTTTGTCACACTATAATAATATCACTGAGTTGCCTAGCTCTCTTGGAAATTTAATACATCTGCGTTATTTAGATCTCTCCAACACTAAAATTGAAAGATTGCCAGATGTAACATGCAAGCTCTACAATCTGCAGACCTTGTTGTTGTGCAAATGTTGCTCACTCACTGAACTGCCTGAGGATATGGGAAATTTGGTTAATCTACGCCACCTTGATGTCAGTGACACTAAATTGAAGGAGATGCCTATACAAATAGCCAAACTACAAAATCTTCAAACTTTGTCTACCTTTGTTGTCAGCAAACAGCAAGATGGATTGAAGGTTGGAGAGCTGAGAAAATTTCCCCATCTACAAGGGAAACTTTCAATCTCAAAGCTACAAAATGTTACTGACCCCTCTGATGCCTTTCAAGCCAACTTGAAGAAGAAAGAACAAATTGATGAGTTGGCATTAGAATGGGATTGTGATACCACTGAAGACTCACAAATGGAAAGGCTTGTACTTGAACAGCTGCAGCCCTCAACAAATTTGAAGAAACTCACCATCCATTTCTATGGTGGAACCTGCTTTCCAAATTGGTTAGGAGATCCCTCATTTGACAACATGATGTATTTGCGCATCAGTGGCTGTGATCATTGTTGGTCACTTCCTCCCCTTGGACGGTTACTTAGTCTCAAAGAACTCATCATTTCTGGACTAAAATCAATAAAGACGGTTGGTACTGAATTCTATGGAAGTGTTTCCCCTTCTTTTCAGCCATTTCCCTCTTTGGAGATTCTGAGCTTTGAGGAGATGCCAGAGTGGGAGGAATGGGATTTGATTGGAGGAACAGCTATAGAGTTTCCTAGTCTAAGGCGTTTGTTTCTATGTGATTGTCCCAAACTCAAAGGACACATACCAAACAACCTTCCTTCCTTAGTTGAACTTGAGCTGTCCCAATGTCCTCTACTCAAGTCACAACATCCATATGAAGTGAATAACAGCTACCTTAGAAGGCCATCACATCTTGGATGGATGATGCTTAGCTTTAATTCTCTTAGAGAGTTGACTATCTCAGGCTTTCCCTCTTTAACATCCTTCCCGAGAGATGTTCTTCCCACAACATTACTATCTCTCACATTCCTTTCTTGTGAGAATCTTGAATTCTTACCTCATGAATCCTTGTCGAGTTACACATCACTTGAGAAACTGCAAATATTCAATAGCTGTGATTCAATGACAGTCTTTCAGTTAGGTTGTTTCCCGGTCCTCAAAAGTCTATTCATCTTGGGTTGTAAAAATATGAAATCTATATCTGTTGCAGAAGATTCATCCCAGAGTCTCTCTTTTCTTCAAAGTTTATCCATATATGCTTGTCCTAATCTGGAGTCATTTCCACTAGGTGGAATGGCCACTCCTAACCTCAACCATTTCTTGGTGTCAAGTTGCCGCAAGCTTAAGTCACTACCAGAACCAATGAACACTCTTTCTGGCCTTTATCAATTGAGTATTTATGGGCTGCCAAATTTGCTCGCTTTTGCAAGAGATGGTTTACCTATCAATTTAAGGATACTTGAAGTCTCCAAATGTTGGAGTTTGTCAACTACAGCAATCACTAGGTGGGGTTTGCAATGCCTTACTTGTCTTGCAGAGTTGCGAATTCGAGGTGACGGTCTTGTGGATGCACTGATGAAAATGAAAGCACCATTGCTTCCTACTTCTCTTGTGTCCCTACGCATCTCTCATCTTTATTATCTAAAATGCTTGGAAGGGAAGTGGCTTCAGCATCTCGCCTCTCTTGAAAACGTTGAGATTTCTGACTGTCGCCGGCTTGAATCCTTACCAGAAGAGGGACTGCCTTCCTCTCTTTCAGTACTGACTATTAAGCGCTGCCCGTTATTAGAAGCAAGTTGCCAGAGTAATGGAGGGAAAGAGTGGCCTAAGATTTCTCACATTCCATGCATAATTATCAATAACAAAGTGACAATTTGA 3756 0.3983 MSFVGEAFLSASVEVLLERIISHEFLYFFRSKELDVSLLKKLKITLLSLQAVLNDAEEKQITNPAVKEWLDELRDALYDADDLLDEINTEALRCKVEEAVFQSKSQQPISDQVLNFLSSPFKRFSGVLNSEIQALLQRLEQFSVQKDILGLKEGVSGRVWHGTPTSSVVDESAIYGRDDDKKILKGYLMSEDDSGSGSKIGVITIVGMGGLGKTTLAKLLYNDHEVKRKFDLKAWAYISKDFDVCSVTKSLLESVSSKPVVTNNLNTLQVELQQSLSNKRFLLVLDDIWDGSYDDWNNLKAIFKAGEMGSKIIITTRDESVALAMQTYLPIHYLRSLRSEDCWSLLAHHAFGPNNCKQQSKLEVIGKEIAKRCGGLPLAAEALGGLLRTKLLEKEWNKVLKSNIWDLPNVKVLPALLLSYHYLPSPLKRCFAYCSIFPKNSSLDKKMVVLLWIAEGLVHQSKCGKTMEEVGDEYFDELVSRSLIRRQNVNEKENFMMHDLINELATIVSSAYCVRHEDSKPHESLEKVRHLSYNRGRYDCFNKFHTFYGSKCLHTFLALPLRHWWSSKYPNLRSHYLSSKLLFDLLPAMRRLRVLSLSHYNNITELPSSLGNLIHLRYLDLSNTKIERLPDVTCKLYNLQTLLLCKCCSLTELPEDMGNLVNLRHLDVSDTKLKEMPIQIAKLQNLQTLSTFVVSKQQDGLKVGELRKFPHLQGKLSISKLQNVTDPSDAFQANLKKKEQIDELALEWDCDTTEDSQMERLVLEQLQPSTNLKKLTIHFYGGTCFPNWLGDPSFDNMMYLRISGCDHCWSLPPLGRLLSLKELIISGLKSIKTVGTEFYGSVSPSFQPFPSLEILSFEEMPEWEEWDLIGGTAIEFPSLRRLFLCDCPKLKGHIPNNLPSLVELELSQCPLLKSQHPYEVNNSYLRRPSHLGWMMLSFNSLRELTISGFPSLTSFPRDVLPTTLLSLTFLSCENLEFLPHESLSSYTSLEKLQIFNSCDSMTVFQLGCFPVLKSLFILGCKNMKSISVAEDSSQSLSFLQSLSIYACPNLESFPLGGMATPNLNHFLVSSCRKLKSLPEPMNTLSGLYQLSIYGLPNLLAFARDGLPINLRILEVSKCWSLSTTAITRWGLQCLTCLAELRIRGDGLVDALMKMKAPLLPTSLVSLRISHLYYLKCLEGKWLQHLASLENVEISDCRRLESLPEEGLPSSLSVLTIKRCPLLEASCQSNGGKEWPKISHIPCIIINNKVTI* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02280 1251 Pfam NB-ARC domain 184 401 IPR002182 GO:0043531
Rops7g02280 1251 SUPERFAMILY L domain-like 937 1238 - -
Rops7g02280 1251 ProSiteProfiles Leucine-rich repeat profile. 615 636 IPR001611 GO:0005515
Rops7g02280 1251 PANTHER DISEASE RESISTANCE PROTEIN RP 34 909 IPR044974 GO:0006952
Rops7g02280 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 434 IPR027417 -
Rops7g02280 1251 FunFam Probable disease resistance protein At1g61300 162 328 - -
Rops7g02280 1251 Gene3D - 161 329 IPR027417 -
Rops7g02280 1251 Gene3D - 33 127 - -
Rops7g02280 1251 SUPERFAMILY L domain-like 497 917 - -
Rops7g02280 1251 PRINTS Disease resistance protein signature 275 289 - -
Rops7g02280 1251 PRINTS Disease resistance protein signature 202 217 - -
Rops7g02280 1251 PRINTS Disease resistance protein signature 896 912 - -
Rops7g02280 1251 PRINTS Disease resistance protein signature 373 387 - -
Rops7g02280 1251 Pfam Rx N-terminal domain 8 102 IPR041118 -
Rops7g02280 1251 Gene3D - 419 506 IPR036388 -
Rops7g02280 1251 Gene3D Ribonuclease Inhibitor 553 921 IPR032675 -
Rops7g02280 1251 SMART LRR_typ_2 589 612 IPR003591 -
Rops7g02280 1251 SMART LRR_typ_2 660 683 IPR003591 -
Rops7g02280 1251 SMART LRR_typ_2 613 636 IPR003591 -
Rops7g02280 1251 Coils Coil 39 59 - -
Rops7g02280 1251 Pfam Leucine Rich repeats (2 copies) 591 631 IPR025875 -
Rops7g02280 1251 Coils Coil 70 90 - -
Rops7g02280 1251 Gene3D Ribonuclease Inhibitor 1098 1242 IPR032675 -
Rops7g02280 1251 Gene3D Ribonuclease Inhibitor 922 1097 IPR032675 -
Rops7g02280 1251 FunFam Probable disease resistance protein At1g63360 420 507 - -
Rops7g02280 1251 Gene3D - 336 418 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02280 Rops-Chr7 40295975 40307686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02280 603 697 WRKY Transcription Factor Family AT4G12020 41.667 2.21e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02280 - - vun:114184488 1623.6