Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02277 ATGCCGAGCTTCGATTCACAATTACCAAATTCCAATGCATGCTATACAGAGGGAAGCACAATTGATTCTTTTCGTGTGTCTGACTTTGATCAACCAGTTGGATATCGCTTAGAGGATGCTGTTGACTTGAGTGGAAACTCAGTTTTTAACTCCCTAAAAGTAAGTAGCCAAACTATATCTGGTGGTCCTGTTCACATTGGTACTTTGGATAAGTTGCCAACTTCACTTGATAAAAGCCCATTGACGAACCAAGCAGAGCAACAGAGCTTGCAATTACAAAAGTTTCAATCATCAAATCTTATCACAATATCAAGTTGTAATACAGAAAATCAGGAAGAGTCTGCCATGGCTGATGCCAGTCCTAGAACGGATATCTCTACAGATGTTGACACTGATGATAAGAATCAGCGGTTTGATAGAAGTCAGTCCCTTGTTGCTGTGGCTTCCGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGGTTGAGGAAAAAAGCTTATGTCCAACAGTTGGAAAGTAGTCGATTGAAGTTGACTCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAATCTTTATATCAAGCTCAGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATACGCAAGGTGGCTGGAAGAGCAGAATCGGCAAATTAATGAGCTGAGAGCAGCTGTAAATTCTCATGCAAGTGATACAGAACTTCACATGGTTATTGATGGTATATTGGCACATTATGATGAAATATTCAGGCTGAAGGGTATTGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCGGCTGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGATCATCTGAACTCCTCAAGCTTCTGATAAATCAGTTGGAACCTCTCACAGAGCAGCAGCTAATGGGTATTACCAACTTGCAGCAATCTTCCCAACAGGCGGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTTCTGAGACATTGTGCACTGGATCACTAGGCTCCTCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAGGGCTTTATTAGGCAGGCTGACAATTTGCGCCAGCAGACGCTGCAACAAATTCACCGTATACTGACAACTCGCCAATCGGCTCGTGCACTCCTTGCAATACATGATTACTTTTCTAGGCTACGTGCTCTTAGCTCCCTTTGGCTTGCCCGCCCAAGAGATTGA 1344 0.4457 MPSFDSQLPNSNACYTEGSTIDSFRVSDFDQPVGYRLEDAVDLSGNSVFNSLKVSSQTISGGPVHIGTLDKLPTSLDKSPLTNQAEQQSLQLQKFQSSNLITISSCNTENQEESAMADASPRTDISTDVDTDDKNQRFDRSQSLVAVASDSSDRSKDKTDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHASDTELHMVIDGILAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLINQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLSETLCTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02277 447 Coils Coil 181 208 - -
Rops7g02277 447 PANTHER TRANSCRIPTION FACTOR TGA9 97 446 - -
Rops7g02277 447 SMART brlzneu 158 221 IPR004827 GO:0003700|GO:0006355
Rops7g02277 447 Coils Coil 238 258 - -
Rops7g02277 447 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 165 180 IPR004827 GO:0003700|GO:0006355
Rops7g02277 447 Gene3D - 161 213 - -
Rops7g02277 447 MobiDBLite consensus disorder prediction 125 139 - -
Rops7g02277 447 CDD bZIP_HBP1b-like 162 214 - -
Rops7g02277 447 SUPERFAMILY Leucine zipper domain 162 205 IPR046347 GO:0003700|GO:0006355
Rops7g02277 447 ProSiteProfiles DOG1 domain profile. 227 444 IPR025422 GO:0006351|GO:0043565
Rops7g02277 447 Pfam Seed dormancy control 244 319 IPR025422 GO:0006351|GO:0043565
Rops7g02277 447 FunFam BZIP family transcription factor 161 210 - -
Rops7g02277 447 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 160 204 IPR004827 GO:0003700|GO:0006355
Rops7g02277 447 MobiDBLite consensus disorder prediction 151 174 - -
Rops7g02277 447 MobiDBLite consensus disorder prediction 109 180 - -
Rops7g02277 447 Pfam bZIP transcription factor 162 202 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02277 Rops-Chr7 40211116 40222247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02277 116 447 bZIP Transcription Factor Family AT3G12250 78.614 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops7g02277 DOG1 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02277 K14431 - gmx:100816123 708.753