Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02275 ATGGCAATGGTGGGGGAGGCTTTTCTCTCTGCTTTGTTCGAAACATTGTTTCAGAAGTTGGCCACTCATGAGATGCTGGACTTCATAAGGAGAATAAAACATGACAATGGTCCTGAGCTGCTAGAAAAGCCGAAGATAACATTGCGGACAGTTGATGCTGTGGTCAACTATGCTGAGGAGAGGCAGACTACCGATTTGCACATAAGGGAATGGCTGAATGATCTTCAGGATGCCATGTTTGAAGCAGACGATCTTTTGGACAAGATCAGTGCATCTGCTTCAAGGCAGAAACTGGAAGGTGTTTTGTTGAGTAGCAGCACACCTGCTTCACTTGGTGGTTTTAGTGAAAGGATGAAGGCCATTATAGGAAAATTTGAAAATCTGATGAAACAAAAAGATGTCTTGGGTTTGAGGGAAGGTGTCACACAGATACCACCCAAAAATCTTAAAACAACCTCTTTAGCAGGAAAATCTTCTGTCTATGGAAGAAATGCTGATAAGGACAATATTATCAAAATTTTGCTCTCAGTATCAGATTTTGGTGGTGATAAGATATGTGTGCTACCCATAGTTGGTATGGGAGGAGTTGGGAAGACCACTCTTGCTCAACTTGTGTACAATGATGAAACAGTCAAGCAGCATTTTGACATCAAAGTATGGGTTTGTGTTAACCAAGAATTTGATGTCTTCAAATTGACCAAGACCATTCTTGAGGCAATCCCTTTATCCTGTGATACAATGGATCTCAATTTACAACAGATTAAATTGAAAGACTTCCTTCATAACAAGAGATTTTTAATTGTTTTAGATGATGTGTGGAACGAAAGCTATACCATGTGGGAGATTTTAAGGCGTCCATTTGAATTTGGTGCTCAAGGAAGTTGTGTACTTGTAACCACCCGCAGTGAAACTGTTGCATCAGCTATGCTTACAGTTCCAAGTTACAATTTAAAACCACTAGCAGATGATGATTGTTGGTTGCTTTTTTCTGAGCATGCATTTGAGGGGGGAAGGTTCATAAGAAGTACTGCACTGGAAGATATTGGAAGGAAGATAGTGAAAAAATGCAGGGGACTGCCATTGGCTGCAAAAGCTCTTGGAGGTCTGTTGCGATCTAAAGTAGATTTAAGAGAATGGGCGAAGGTTCTGGAAAGTAAAATATGGGACTTTCCAAGTGATAGGAGCAATATTCTTCCAGCTCTCATGTTGAGTTATTACTATCTTCCATCAACTCTTAAGCGTTGTTTTGCTTATTGCTCCATTTTCCCCAAAAACTACCAATTTAGAAGAAGGGAACTAGTGCGCTTGTGGATGGCAGAAGATCTTCTTCCACATCCCAAAAGAAATGGAAATTTGGAAGAACTTGGTACTGAATACTTCAATGATCTAGCATCGAGATCATTCTTTCTTAAATCAAGCAGTAGACACTTTACCATGCATGATCTAATTGTTGATTTATCTGAATTTGTCTCTGGAGAGTTCTCATTCAGATTGGAGGGAGAGAAGAATAGTCACCTGTCAAAAAGAACTCGTCATTTGTCATATTCAAAGCTTCAGTTTGATGATTTGGAGAAAATTATGGCTACATGTGAAAACCTACGAACTTTTCTTCCATCACAAGTTTTGTCATGGCCAAGATGTTTGAACAATGAGGCTGTGGGCAGCATAATATCAAAACATAAAAGTTTAAGGGTCCTTTCTCTGTCACACTGTGGTAATTTGACAGCTTTACCTGACTTCTTGGGTGACTTGATACATTTACGATATCTAGACCTCAGTGTCACTCCAATCTCCAAGTTACCTGAGTCTACATGTTCTCTGCACAATTTACAGATTTTATTGTTGATAAACTGTACTTGTCTCACTGAATTGCCACTGAAAATGGGAAGGCTGACCAACTTAAAGTATTTGGATATTAGGGGAACAAAATTAAGTGAAATGCCACTTCATATGGGTAGTTTGACAAATCTTCAAACCTTGACTGGATTTGTTCTGGGAAGTGGACAAGGGTCAGGCATTGAAGAGCTCAAGAATTTTTCTTTTCTTAAAGGAAATATTTCTATTTCAAATCTCCAAAATATCAGTGATCCACATGATGCTATGAAGGCTAATTTGCTGGGAAATATGCAACTTAATGAATTAATGTTGAGTTGGAGCAAAAATGCAGATGATTCAAAAAATGTCAGAAGCATATTGCAATGGTTGGAACCTCCCAAGACCTTGAAAAAGCTTACGATTAGAAATTATGGTAGTACTTCATTCCCCTCCTGGTTAGGAAATTGTCAGTTCTCAAAATTAGGATCTATATCCCTTTATGATTGTGTAAATTGTCTTTCTTTGCCTACATTGGGGCAATTGCCTTCCTTGCAAGCCCTCACCTTGGTGGGGTTTATGATTGTCACTCATGTAGATGGTGAGTTTTATAGCAATTCTTCTATGGAAGTGAAGCAATCTCAGAGACACAAGACTACACCATTTAGGAGCCTTGAGACTTTGCGTTTTGAGAACCTGCCCCAATGGCAGGAATGGCTTCCTTTTGGGGAGGAAGGGAAGGAAGATGCAGATGGAGCATTCCCTAGTCTTAAACGACTTTATATAAAAAATTGCCCAAAACTGAAGGGCTTGAATTTTATCCAAAGATCACCTGCTCTAGAAAAGATTGTCATTGCAAAATGTGAGCAGCTTGTGGTTGTAGTTCCCCCAGCAATCTGTGAATTACAATTAGAAAGTTGTGAGAAGGTTTCAATCCAAAGGCCACTGCCCCAGTTGATAAACCTGACAATCAGTAGCTATGATGCAGTGGAGTCACTATTTAAGGGAATAGACAACAGAAGTTCTTGCATTGAAAAGTTGAGCATCTCAAGTTGTCCTCTCATACAGCAGCTTCCAAGTAATGGTATTGCAAACACAATAAAATCTCTTAACATTACAAACTGTGAGAAAATTGAGTTTCCTATGAACCAATGCTTTTCATACCTTGAGAGCTTATGCATCAAATGGAGCTGTGATTCCCTGAGGTCTTTCACAATGGACTTGTTTCCAAAGATGGTCCACCTTGAAATACAAGGATGTCAAAATCTGGAGTCTCTCGTGGTTTCCGGGGTGCATGTGCAGTATCTTCAATCTCTGAATTCCTTAAGGATCTGTGATTGTCCTAATTTTGTATCATTTCCTGTAGGTGGACTCCCAGCTCCAAATCTGACAAATTTAAGTTTGAAAAAATGTAAGAATTTAAAATCTCTTCCTTGGCAGATGAACAAGCTGCTCCCATCCCTCATGACTTTGAACATACAAGAGTGTCGTGAAATTGAGTCATTTTCAGATGGAGGTTTGTCAGAGAGTCTGAACTCGCTTGGGATCTTTCATTGTGATAAACTGTTTACCAACAGGAAGAACTGGGATTTGCAAAGACTGCCCTCTCTTAGAAGCATTGCAATAGCAGGTATATGTCAAGATGGGGAATCCTTTCCAGAACAATGGTTGCTGCCATCAACTCTTACATCCTTACATATCCTTCAACTTGGGAATTTGAAGTATCTAGATGAAGACAGTCTTCAGCAATTGACATCTCTAGAAACTCTGGGGATTGCACGCTGCGCAAAACTTCAGTGTATGCCGGCAAAGCTTCCTTCTTCAATTTCTAAACTTCATATCATGGAAAGTCCAAGACTTGAAGAAAGATGTAAAGGAAAGAAATCTGAAGATTGGCCCAAAATTGCTTACATACCCATGATACGGATCAACAAGAAATTTGTCCAATAG 3762 0.3942 MAMVGEAFLSALFETLFQKLATHEMLDFIRRIKHDNGPELLEKPKITLRTVDAVVNYAEERQTTDLHIREWLNDLQDAMFEADDLLDKISASASRQKLEGVLLSSSTPASLGGFSERMKAIIGKFENLMKQKDVLGLREGVTQIPPKNLKTTSLAGKSSVYGRNADKDNIIKILLSVSDFGGDKICVLPIVGMGGVGKTTLAQLVYNDETVKQHFDIKVWVCVNQEFDVFKLTKTILEAIPLSCDTMDLNLQQIKLKDFLHNKRFLIVLDDVWNESYTMWEILRRPFEFGAQGSCVLVTTRSETVASAMLTVPSYNLKPLADDDCWLLFSEHAFEGGRFIRSTALEDIGRKIVKKCRGLPLAAKALGGLLRSKVDLREWAKVLESKIWDFPSDRSNILPALMLSYYYLPSTLKRCFAYCSIFPKNYQFRRRELVRLWMAEDLLPHPKRNGNLEELGTEYFNDLASRSFFLKSSSRHFTMHDLIVDLSEFVSGEFSFRLEGEKNSHLSKRTRHLSYSKLQFDDLEKIMATCENLRTFLPSQVLSWPRCLNNEAVGSIISKHKSLRVLSLSHCGNLTALPDFLGDLIHLRYLDLSVTPISKLPESTCSLHNLQILLLINCTCLTELPLKMGRLTNLKYLDIRGTKLSEMPLHMGSLTNLQTLTGFVLGSGQGSGIEELKNFSFLKGNISISNLQNISDPHDAMKANLLGNMQLNELMLSWSKNADDSKNVRSILQWLEPPKTLKKLTIRNYGSTSFPSWLGNCQFSKLGSISLYDCVNCLSLPTLGQLPSLQALTLVGFMIVTHVDGEFYSNSSMEVKQSQRHKTTPFRSLETLRFENLPQWQEWLPFGEEGKEDADGAFPSLKRLYIKNCPKLKGLNFIQRSPALEKIVIAKCEQLVVVVPPAICELQLESCEKVSIQRPLPQLINLTISSYDAVESLFKGIDNRSSCIEKLSISSCPLIQQLPSNGIANTIKSLNITNCEKIEFPMNQCFSYLESLCIKWSCDSLRSFTMDLFPKMVHLEIQGCQNLESLVVSGVHVQYLQSLNSLRICDCPNFVSFPVGGLPAPNLTNLSLKKCKNLKSLPWQMNKLLPSLMTLNIQECREIESFSDGGLSESLNSLGIFHCDKLFTNRKNWDLQRLPSLRSIAIAGICQDGESFPEQWLLPSTLTSLHILQLGNLKYLDEDSLQQLTSLETLGIARCAKLQCMPAKLPSSISKLHIMESPRLEERCKGKKSEDWPKIAYIPMIRINKKFVQ* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02275 1253 Pfam Rx N-terminal domain 8 104 IPR041118 -
Rops7g02275 1253 Gene3D - 404 488 IPR036388 -
Rops7g02275 1253 Gene3D Ribonuclease Inhibitor 495 851 IPR032675 -
Rops7g02275 1253 Gene3D - 10 134 - -
Rops7g02275 1253 Gene3D Ribonuclease Inhibitor 1036 1248 IPR032675 -
Rops7g02275 1253 Gene3D Ribonuclease Inhibitor 856 1035 IPR032675 -
Rops7g02275 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 419 IPR027417 -
Rops7g02275 1253 FunFam Probable disease resistance protein At1g61300 145 312 - -
Rops7g02275 1253 Gene3D - 320 403 IPR042197 -
Rops7g02275 1253 PANTHER DISEASE RESISTANCE PROTEIN RP 66 973 IPR044974 GO:0006952
Rops7g02275 1253 PRINTS Disease resistance protein signature 558 574 - -
Rops7g02275 1253 PRINTS Disease resistance protein signature 187 202 - -
Rops7g02275 1253 PRINTS Disease resistance protein signature 356 370 - -
Rops7g02275 1253 PRINTS Disease resistance protein signature 259 273 - -
Rops7g02275 1253 Gene3D - 142 312 IPR027417 -
Rops7g02275 1253 Pfam NB-ARC domain 166 384 IPR002182 GO:0043531
Rops7g02275 1253 SUPERFAMILY L domain-like 906 1239 - -
Rops7g02275 1253 SUPERFAMILY L domain-like 479 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02275 Rops-Chr7 40182313 40186074 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02275 190 796 WRKY Transcription Factor Family AT5G45050 26.154 2.54e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02275 - - lja:Lj0g3v0087809.1 2045.4