Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02273 ATGCCACTCATGGCTTTCGATTCTAAGCAGCGAAAAGAAAAAGAAGAAAAAGAAGAACAACCTTACACAATAGAAGAAGAAGATGATGATGATGATGATAATGATGATGAAGAAGAAGAAGCAGAAGATTGGGGCGATTGGGAAGGAGAAGACGAGGGAGAATCACAATCTGAATTCCTGTGTCTCTTCTGTGATTCCAATTACAGTTCGTGCGGTTCATTGTTCGAACATTGCGCTTCCATTCACCACTTCGATTTTCACGCTGTTAGGAAAGCTCTTAACTTGGATTTCTATGCTTCCTTCAAGCTCATTAATTACATTCGCTCTCAGGTGGCAGAGAGCAGATGTTGGAGCTGTGGATTAACATTTCAGTCCAACCATGATTTACAGAATCATTTGCATGATGTAATCAACTTCAATGACATTAAGCCTCTGTGGGATGATGATAGATATCTAAAACCTTTCATGCTAGATGATTCACTGTTGTACAGTTTTGGTGAATACGAAGAAGAAGAAGATGAAGATGAGCAAATTCCACCTATTGATGAAGATCTTATGAGGGATTTGAAGAACACTGGAGTAATTTATGATGATGATCAAAATGCTGTGAAAAAGGTGGTGGTTAATGATGACATAGACGATTCTTGTAGAAGAAAGGAGACTGCTTCTGTTTCTGATGATCATTCGAACTGGGCTAGTTCTTCTGATAAGGAACTTGTTAATGGGAAGGGCTCAAGAGGATATGTTTCATCAATTGATAAGGATCCAGAAGAAGGGCATTTGATGGCTAATTCTAAAAATCACATTGCAAAGCATATTAAGAAGATTAACGAAAGTTATTTCGGGTCTTACAGTTCATTTGGCATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCAATTCTGAAGAATCCCTCTCTACTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTCAGCCTATTTGCAGCACAAGCAGGGGCTTTGAGGGTTATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCACAGGTTGCAAAAGATAACGGTCTCGGGCTGATTAAAGGCCAAAATGGAGTCAATGATCTCCAAAAGGGAGTCATAGAAGTGGTTCATGGCATGGTTGAAAAGATTGACAAAACTGTAGAACTTCAACCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCCTGTTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGTGACCGGTGGTTGAAGCCTGGAGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGGTACAAGTCTTCCATTTTGGGAGAATGTGTATGATTTTGATATGTCTTGCATTGGGAAGGAGCTTGTCACAGATGCTGCCCAATTTCCTATTGTTGATGTCATGGACCATCAAGATTTAGTCACCAGTTCTGCGATTCTTCAGACCTTTGACTTGGCAACAATGAAGCCCAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAACCAAAATCAAGTGCTTCAGAAAACGAAAAAACACATTCAAATTCTAGAACATGCAGCTGGTGTTATGGAGTTGTCCTATGGTTTGAAACTGGATTCACAAGTAGATTCTGCCAGGAAACACCTGCTGTGTTATCCACATCCCCGTACACTCCAAAAACGCATTGGTCACAAACAATCTTAACCTTTAGGGAACCCATTGTCATCGGATTTGGAAAAGAAAACGGATATAAACCGGAATCAATTGGCACTGAAGTTCATCCTGCTGCAAAGATTGATTTGCGTGTCAGCATTGTCCGTTCGACAGAGCATCGCAGCATTGACATTTCCATGGAAGCTGCTGGTGTTGGTCCTGATGGTAACAGACACAGTTGGCCTGCACAACTTTTTTCTCTGCAGTAG 1959 0.414 MPLMAFDSKQRKEKEEKEEQPYTIEEEDDDDDDNDDEEEEAEDWGDWEGEDEGESQSEFLCLFCDSNYSSCGSLFEHCASIHHFDFHAVRKALNLDFYASFKLINYIRSQVAESRCWSCGLTFQSNHDLQNHLHDVINFNDIKPLWDDDRYLKPFMLDDSLLYSFGEYEEEEDEDEQIPPIDEDLMRDLKNTGVIYDDDQNAVKKVVVNDDIDDSCRRKETASVSDDHSNWASSSDKELVNGKGSRGYVSSIDKDPEEGHLMANSKNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGALRVIAVEASAKMAAVASQVAKDNGLGLIKGQNGVNDLQKGVIEVVHGMVEKIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGGTSLPFWENVYDFDMSCIGKELVTDAAQFPIVDVMDHQDLVTSSAILQTFDLATMKPNEVDFTATATLEPKSSASENEKTHSNSRTCSWCYGVVLWFETGFTSRFCQETPAVLSTSPYTPKTHWSQTILTFREPIVIGFGKENGYKPESIGTEVHPAAKIDLRVSIVRSTEHRSIDISMEAAGVGPDGNRHSWPAQLFSLQ* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02273 652 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 277 604 IPR025799 GO:0016274|GO:0018216
Rops7g02273 652 Gene3D - 441 646 - -
Rops7g02273 652 Pfam Methyltransferase domain 319 434 IPR041698 -
Rops7g02273 652 MobiDBLite consensus disorder prediction 226 240 - -
Rops7g02273 652 FunFam Protein arginine N-methyltransferase 6 273 438 - -
Rops7g02273 652 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 283 592 IPR029063 -
Rops7g02273 652 MobiDBLite consensus disorder prediction 1 51 - -
Rops7g02273 652 SUPERFAMILY beta-beta-alpha zinc fingers 39 177 IPR036236 -
Rops7g02273 652 Pfam C2H2 type zinc-finger (2 copies) 61 135 IPR041661 -
Rops7g02273 652 CDD AdoMet_MTases 319 437 - -
Rops7g02273 652 MobiDBLite consensus disorder prediction 219 257 - -
Rops7g02273 652 Gene3D Vaccinia Virus protein VP39 269 438 IPR029063 -
Rops7g02273 652 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 62 633 IPR025799 GO:0016274|GO:0018216
Rops7g02273 652 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02273 Rops-Chr7 40125192 40130432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02273 34 651 C2H2 Transcription Factor Family AT3G12270 55.259 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02273 K11436 - gmx:100781879 900.968